Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1533 |
Symbol | recC |
ID | 2685314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1680276 |
End bp | 1683440 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637126212 |
Product | exodeoxyribonuclease V, gamma subunit |
Protein accession | NP_952584 |
Protein GI | 39996633 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGCCC TGGTCGAGCA GCTTTGCGCC GTGGTCGAGC CCCCCCTGTC GTCACCCTTT GTTCCCGAGA CCATCGTGGT GCAGAGCCGG GGCATGGAAC GGTGGCTCGC CATGGAGCTG GCAAAGCGCC TGGGGATCTG GGCGAACGGC TCCTATCCCT TTCCCAATGC CTTTGTCTGG TCGCTCTTCC GGGCGGCGCT GCCCCATCTG CCGGACCAGT CCCCCTTTGA CCCCGCCATC CTGACTTGGC GGATCATGGA CCTGCTGCCG CGCCTGCTCC CGGAACCGGC CTTCGGCCAG TTGCGGGGGT ATCTGGCCGG GGAGGACCGG GAACTGCGGC TCTACCAGCT TGCGGCCAGG ATCGCCGACA CCTTTGACCA GTACACCGTG TTCCGGGGCG ACCTGCTGGC GACCTGGGAA ACGGGGCGGG ACCAGCAGTG GCAGGCCCGG CTCTGGCGCG CATTGACCGC GGACAGCCCC GGTACCCACC GGGGGGCCGT GCGCGACGCA TTTCTGAAAC AGCTGGCCGG GGGGCGTCTC CCTGCCGGCG TCTGCCCCGA ACGGGTGTCG GTCTTCGGCA TCTCGTACCT TCCGCCGTTC CACCTGGAGA TCTTCACCTC CCTGGCCCGG CTCTGCCCGG TGAACCTGTT CGTCCTGAGC CCCTGCCGGG AATACTGGGG GGATATCGTC TCGCCCGGCG CCCGGGCGCG GATGACCCCG GAGCGCCGGC AGCAGGCCGT GGAGGGGCAT CCGCTGCTTG CCTCCCTGGG CAAGCCGGGG CGCGATTTCT CGTCCCTCAT CCTGGCCTGC GACGACTTGT CGGGCGGCGA GCGCGACCTC TATGCCGACG CCCCCGGCGA AACGCTCCTG GCAGCGGTGC AGAACGGCAT CCTTACCCTG GACGAGGCCG ACGGCACTCC GCGCCTGGTC CGGGTGGACC CCGGCGACCG CTCGATCGGG ATTCATTCCT GTCACGGCCC CATGCGCGAG GCGGAGGTGC TCCACGACGT CCTGCTGGCC ATGTTCGAGG ACCTGCCCGG CCTCACGCCC CGGGATATCC TCGTGATGAC GCCGGACATC GAGACCTATG CCCCCTATGT TGCCGCGGTG TTCGGCGGCG GTCAGGACCA GCGGCGGCGC ATCCCGTTTT CCATTGCCGA CCGGAGCATC AGGAGTGCGG GGGGAGCGGC CGACGCCTTC CTGGCCATCC TCGATCTCCC CCTGGGCCGC TTCCCGGCGA CCGGTGTGCT GGACATCCTG GAGACCGGCG CGGTCCACCG CCGTTTCGGC ATCGACGAGG CCGGTCTCGA ACAGATCCGC TCCTGGGTTG AGGCCACCCG CATCCGTTGG GGCATGGACG AGAACGAGCG CCGGGCTGCC GGGCTGCCTG CCTACCGGGA GAACAGCTGG CAGGCGGGGC TCGACCGGCT GCTGCTGGGG GTGGCCATGC CCGACGAGGA AGGGGCCATG TTCGGCGGCA TCCTCCCCCA CGATGCCATG GAAGGGGACG GGCCGGTGCT CCTGGGGCGC TTCATCCGCT TCGTGGAGGC CCTGGAGCGG GTGCGGCAGG ATCTGGCGCG CCCCCGCTCC CTTGAGGGGT GGACAGCGAC CCTGCGCGGC ATCCTGGCCG ACTTCTTCAA TCCCGATGAC GCCACCGCCT TCGAACGTGC CGCCTTGGGC AGGATCGTGG ACGGCCTCGG CGAACTCGGC GCGGGCTCCG GCTTCACGGA CGAGGTGGGG CGGTCCGTGA TCAGGGCCTG GCTCGGCGAA CGGCTCGACA GGCCCGACCA GGGGCTCGGC TTCATGACCG GCGGGGTCAC CTTCTGCGCC ATGCTCCCCA TGCGGAGCAT CCCTTTCCGG GTGATCTGCC TGCTGGGGGT GAACGACGAC TCCTTCCCCC GCCGGGACCG CGCCGCCGGC TTCGACCTGA TGGCCGCAGA CCGCCGTCCC GGCGACCGGT CCCTGCGGGA GGAGGACCGC TACCTCTTTC TGGAAGCCCT CCTCTCGGCC CGGGAGCGCC TGGTGATCAG CTACACCGGT CAGAGCGTCC GGGATAACGC CGAGCTTCCC CCGTCGGTGC TGGTGAGCGA GTTCCTCGAC TACCTGGGAT CGCGCTTCAC GGACGGCACC GACCGGTTCC CGGCCTCCCT GGTGACACGG CACCGGCTCC AGCCCTTCAG CCCCGCCTAC TTCACCGGTG ACGGCGGGCT GTTCAGTTAC GCGGCCGAAG AGTGTCGCGC CCTGTCCCGT CGCGGCAGGG ACGACGCACC GCGCCCCTTC CTGGAGCACC CCCTGGCCGA GTCCGGTCCG GCGTCGGCCG ACGAAACGGA GATCCTGCCC CTGGCGCAGC TCATCTCCTT TTTCGAGCAC CCGGTGCGCT ACCTCATGCG TCACCGGCTC GGCATCCGCC TGGAGGAGAG CCGCTCCCCC CTGGAGGACC GGGAGCCCTT TGCCCTGGAC TCTCTGGATG CCTTCCTGCT GGAACAGGAG ATCCTGGACC ACATTCTGGC GGGCGGCGAC CCGGCCGACC TCCTCCCCGT GGCCCGGGCC CGGGGCGGCC TGCCCCCGGC GCGCCAGGGA GAGCTGGCCT TTGCGGGGCT CACCGCCCGG GTGCGGGACC TGGCCGACCG GGTCCGGCCG GCAACCAACG GCCAGCCCCC CCTCGAACCC CTGACCGTGG ACCTGCGGGT GGGTGAGCGG CGGCTCGTGG GCGAGCTGGG TTCCCTCTGG CCCGCCGGCC TTATCCGCTG GCGCTGTGCC AGGCTGTCCG GCCGCGACCA CATCCGGCTC TGGATTGAGC ACCTGGTTTT CAATGCCCTG GCATTGCCCG CCACCGGGGC GGCAAGCAGG CTCCTGGCCG CTGACGGCGA CCTGGCGCTC CGTCCCGTGG CCGATCCCCT TGCGCACCTG GAGGCTCTGG TGTCGTACTA CGGGCAGGGG AGCCGGGAGC CGCTGCGGTT CTTCCCGCGC AGCTCCCTGG CCTTTGCCCG CACGGGCGAG ATGGCGGCGG CCCGCACCAC CTGGGGGGGA GACTTCTACC CAGAGGGGGA CGATCCCTAC TATGCGCTCT GCTTCGGCAC TGCCGATCCC CTGGACGACG CCTTCCGCGA GACGTCCGTC GCAATCCTGA CCCCCCTGCT GGCCCACCGG GAGGACGAGC GGTGA
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Protein sequence | MEALVEQLCA VVEPPLSSPF VPETIVVQSR GMERWLAMEL AKRLGIWANG SYPFPNAFVW SLFRAALPHL PDQSPFDPAI LTWRIMDLLP RLLPEPAFGQ LRGYLAGEDR ELRLYQLAAR IADTFDQYTV FRGDLLATWE TGRDQQWQAR LWRALTADSP GTHRGAVRDA FLKQLAGGRL PAGVCPERVS VFGISYLPPF HLEIFTSLAR LCPVNLFVLS PCREYWGDIV SPGARARMTP ERRQQAVEGH PLLASLGKPG RDFSSLILAC DDLSGGERDL YADAPGETLL AAVQNGILTL DEADGTPRLV RVDPGDRSIG IHSCHGPMRE AEVLHDVLLA MFEDLPGLTP RDILVMTPDI ETYAPYVAAV FGGGQDQRRR IPFSIADRSI RSAGGAADAF LAILDLPLGR FPATGVLDIL ETGAVHRRFG IDEAGLEQIR SWVEATRIRW GMDENERRAA GLPAYRENSW QAGLDRLLLG VAMPDEEGAM FGGILPHDAM EGDGPVLLGR FIRFVEALER VRQDLARPRS LEGWTATLRG ILADFFNPDD ATAFERAALG RIVDGLGELG AGSGFTDEVG RSVIRAWLGE RLDRPDQGLG FMTGGVTFCA MLPMRSIPFR VICLLGVNDD SFPRRDRAAG FDLMAADRRP GDRSLREEDR YLFLEALLSA RERLVISYTG QSVRDNAELP PSVLVSEFLD YLGSRFTDGT DRFPASLVTR HRLQPFSPAY FTGDGGLFSY AAEECRALSR RGRDDAPRPF LEHPLAESGP ASADETEILP LAQLISFFEH PVRYLMRHRL GIRLEESRSP LEDREPFALD SLDAFLLEQE ILDHILAGGD PADLLPVARA RGGLPPARQG ELAFAGLTAR VRDLADRVRP ATNGQPPLEP LTVDLRVGER RLVGELGSLW PAGLIRWRCA RLSGRDHIRL WIEHLVFNAL ALPATGAASR LLAADGDLAL RPVADPLAHL EALVSYYGQG SREPLRFFPR SSLAFARTGE MAAARTTWGG DFYPEGDDPY YALCFGTADP LDDAFRETSV AILTPLLAHR EDER
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