| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1484 |
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| Symbol | |
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| ID | 2686170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1624300 |
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| End bp | 1626543 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637126160 |
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| Product | soluble lytic murein transglycosylase, putative |
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| Protein accession | NP_952535 |
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| Protein GI | 39996584 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.180895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCA GACTCCTTGT TGTCTCCCTC GCCTGCCTCC TGTTCGGGGT GTCAGCTTTT
GCGCAGCCCA TGGCTCCGGT CCCTGATGCA CCGCTCCGCA ATGCAGCACT TCGCATGAAG
GATAAAGATT ATCGCGCTGT GCGCGATGAG CTGCGCTCCG TCCCGCCATC TCCCGAGCGG
ACCTTCCTGG ACGGCGTGGC AGCCCGTCGC CTTGAGCAGT GGCCCGAAGC CTCCGAGCTT
CTTGGCGTTG CGGCAAAGGA TCTTCCGCTG TTGGCCGATT ACGCACTGTT CTGGCAGGCG
GAGGCACTCA TGGCGGCGAC CCGCTACGAC GAGGCGGAAG AAGTGCTGCA ACGACTCGTG
GGGACCTGGC CCGACAGCCC GACCCTGCGA AAGGCGCGCA TGCTCCTCGC GGATGCCCAG
TTCGCCCGCA AAGAGTACCG TCAGGCCCTT GCCTCCTACA TACGGTTCAT TGAACTGTAC
CCTTCGGGAA CCGACTCAGT CACCGCCAAC CTGAAAACGG CCCTCTGCCG CGAAGGCCTT
GACGACCCGC GACGGGCTGT CCAGGAACTG CGGGCTATCT GGCTTGCCTA TCCGGCATCT
CCCGTGGCTG AAACCGCGGA ACAGGAACTC AAGCGACTTG AGGCGCTCGG ATTCCCTGCC
GTTCCGCTAA CGCCCGATGA ACTCCTCAAA CGAGGAACTA CGCTCTACAA TCTCGGCAAG
TACGAACGCG CCCTTGCCGT CTTCAATACC ATTCCCCTCA AGGAGCAGCT TGCCGGCTTC
AACGACCGCG TGGCACTGAA AATTGGCGAG ACACTCCTAA AACTGAGACG GTACAAGGAT
GCTGCCCGCA CATTCTCCAG CCTCATCGAG CGTGAGCCGA AGCGGGAGAT TGCCGACGAA
GCCCGTTTCC TGCTCGCCCG AGCCCAGAAC AAAGCTGGCA ACGATGACGA GGCATTCCTC
GGCTTTCTCA AGCTTGCGGA GACGGCCCCC ACGTCGGAAT GGGCGGATAA TGCGCTGCTG
GAGGCGGCAT TTGTCCGCAA ATTCCAGGGG CGGTACGCTG ATCAGCTGGC AGTCCTGGAA
AAACTGCTGA CAACCTATCC CGGGACGAAA CTCAAACCTC GAGCAATGTG GGAAACTGCC
TGGGCTCGCT ACAACACCGG CGACTATCGC TCTGCCGCGG AGTCATTCCG GCTTCTGACC
GCTTCTGCCG ACTACCGGGA ACGGGCGCTG TACTGGCACG GGCGTTCCCT CCAGCGCATC
GGAGAAGAAA CCGTGGCCCG GCAGAGTTTT GCCATGCTTG CAGAGGAATA CCCTTTTTCC
TTCTATACCT TTACGGCGAC CGACCCGGCA CCTCAGGAAG GGGCAATACC CCTGATAGTG
CACGACCTGC GCCAGACCAT CTCCCCTCCT GCCGGACACG AACGAGCACG AGCACTTATC
GCCATGGGGC TCCATGATCA GGCCAGGAGC GAACTCTCCA TCGCCCGCAA AAACGGCTCG
TCGCGGGGTA AGGGGCTCCT GGGCATCGCC CGTCTCTACC TGGAGATGAA TGATTATTCA
TCCGCGGCCG CGGCCCTGCG CGGGGAGCAA CCCCGCCGCA TGGACGGCGA AACGGCGACT
ACCTGGGGAC TGCTCTATCC CCGCGGATTC AGCGACTCGG TCGCTGCCGA GGCAAACCGC
CACACTATCC CCGAAGAATT GATCTACGGA CTCATCAAGG CCGAAAGCGG CTTCTCTCCA
GTCGCCCTCT CACCGGTCGG CGCGGTGGGG CTCATGCAGC TCATGCCGTC CACCGCCAAG
GGCATGGTCA ACGGTTCGTC CCCCGCCAAC GGTATTTCAG CGCGCCTCAC TGACCCAACC
TTCAATGTCG GCCTCGGGGT CAGACACCTG AAAGACCTGC TCAAGCAGTA CAACGGCAAT
GTGGTTTCCG CCGTGGCGGC CTACAATGCG GGCTCCAGGC CGGTGGACCG GTGGCGGCGT
TCCCTTGCCG GCCTGCGCGA AGACGAATTC ATCGAGAACA TTCCCTACTA CGAAACCCGC
GAGTATGTAA AAAAAGTCCT GACTTTTGCG GAGGTATACC GCAGGCTCTA CCGTCCTGCC
GCACCGGCCC TTGCGTTTCT TCCCCAGGTC AGCGCACCGG AACCGCCCCA ACCAGCCCCG
ACCAATAATG CGCCGCCAAC CGCGGCACTG GCCAGCCCGC CCGAAACCTC AGCCCTGACT
GCGCCGGTTC GGCAACAGCC TTAA
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| Protein sequence | MYTRLLVVSL ACLLFGVSAF AQPMAPVPDA PLRNAALRMK DKDYRAVRDE LRSVPPSPER
TFLDGVAARR LEQWPEASEL LGVAAKDLPL LADYALFWQA EALMAATRYD EAEEVLQRLV
GTWPDSPTLR KARMLLADAQ FARKEYRQAL ASYIRFIELY PSGTDSVTAN LKTALCREGL
DDPRRAVQEL RAIWLAYPAS PVAETAEQEL KRLEALGFPA VPLTPDELLK RGTTLYNLGK
YERALAVFNT IPLKEQLAGF NDRVALKIGE TLLKLRRYKD AARTFSSLIE REPKREIADE
ARFLLARAQN KAGNDDEAFL GFLKLAETAP TSEWADNALL EAAFVRKFQG RYADQLAVLE
KLLTTYPGTK LKPRAMWETA WARYNTGDYR SAAESFRLLT ASADYRERAL YWHGRSLQRI
GEETVARQSF AMLAEEYPFS FYTFTATDPA PQEGAIPLIV HDLRQTISPP AGHERARALI
AMGLHDQARS ELSIARKNGS SRGKGLLGIA RLYLEMNDYS SAAAALRGEQ PRRMDGETAT
TWGLLYPRGF SDSVAAEANR HTIPEELIYG LIKAESGFSP VALSPVGAVG LMQLMPSTAK
GMVNGSSPAN GISARLTDPT FNVGLGVRHL KDLLKQYNGN VVSAVAAYNA GSRPVDRWRR
SLAGLREDEF IENIPYYETR EYVKKVLTFA EVYRRLYRPA APALAFLPQV SAPEPPQPAP
TNNAPPTAAL ASPPETSALT APVRQQP
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