Gene GSU1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1443 
Symbol 
ID2686248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1579416 
End bp1581380 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content55% 
IMG OID637126117 
Productsensor histidine kinase/response regulator 
Protein accessionNP_952494 
Protein GI39996543 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.676986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATGC ACGACACGCT AAAACAACGG CACGACAGTC TTGGTCTCAG GTTTTTCCTC 
CTCTTTGCAT CAACGATCGC CGTTATATCC ATATCGTTCA CCGTTCTGTT TTACCAGCAG
CAGCGACGCA TACTTCGGGA AAACGTCACC CATGAGGGTC AGATTCTCGC ACGCCTCCTG
GCCCACAACG CCCGGCTGGG CGTCTTTGCG GAGAACGGCG AACTACTCAA AGACCCGGTG
GAGGGCATTC TGCAGCATGA TGGGGTACTT TTCGTCTCGG TCATTTCAGC AGCCGGCACC
CCCATCAGGG AGCAGGCCCA TGAAAAGATG CTCAAGACTC CGGAAAGGAA AATACCCAAC
TGGAGTGTGC ATTTCAGCGA TACACGCTCA AGTAGAGTCC CCCACACCTT CGAGGAAGCC
GAGCTTTTCG AGTTCTGGGC GCCGATCGTC TCCATCGCTC CGTTCCAGAG CACCGATGCG
CTGATCCTAG GACACGAGGC GCAGGGCAAG GAAAAGATCC TGGGGTATGC CCGTATCATT
GTGGACAAAC ACCCCCTCAA GCGACGTCTC GACACGCTTT TGCTCATCTG CAGCACCCTT
ACCGGCGGAT TCCTGGTATT GAGCACCATT CTCACGTATC TTGTGGTACG CCGGATCACC
AATCCGCTCG ACCGACTCAC TGTCGGCATT AAGGCATTGG AGCAGGGTGG CGCTTTCGTC
CCGGTAAAGG TCGAGCGCAA TCACGAAATC GGACGTCTGG CCAATGCCTT CAACCATATG
GCGGAGACGC TTAAAAAGCG CGAAGCGGAG AAAGAACTGC TGGCCGAAGA GCTGCGTCAC
GCCCAGAAGA TGGAAGCAAT CGGTACCCTT GCAGGAGGGG TGGCCCACGA CTTCAACAAT
ATCCTTACGG CTATCGTCGG CTTCGGCACG CTCCTGCAGC GCAGTCTGAA CAAAGATAAC
CCCTACCAGA TTTATGTGGA CCAGATACTT AACGCTGCCG ATCGCGCCAC GACGCTGGTA
AAACGGCTGC TGGCCTTTGG CCGCAAACAG GTTATCACGC CCCTCCCCAC TGATTTGAAC
GGGATCATCC AGAGTATCGA GAAACTTCTG GCCCGCCTCG TGAGCGAGGA TGTGGAGTTC
AAGGTATCTC TCTTCAACGA ACCTCTCGTC TGCCATGTGG ATTCAGGACA AATAGACCAG
ATACTCATGA ATCTCGTAAC CAATGCCCGC GATGCCATGC CGTCAGGAGG GACTCTCACG
CTGACGACCG ATGCGACGGT TCTGAACGAA AATTCCTTCA GTTCGCTGGA ACAGTGCCGG
CCGGGACGTT ATGCCGTTCT GACCGTCAGC GACACGGGCC TTGGCATGGA CCAGGAGACA
AAAGAGCGGA TTTTCGACCC CTTCTTCACA ACAAAGGAGG TTGGAAAAGG CACTGGTCTC
GGCCTGTCGA TGGTATATGG CATCGTGCGA CAACATGAAG GGTTCGTCAC CGTTGATTCC
GAACCGGGCG CCGGCACCAC CTTCCGCATC TATCTTCCGA TCGTGGCATT GACGGCGAGA
CATGAAGAGG AAGCACCACC GATCGTGGCA AAGGGGAACA GGGAAACCGT CCTGCTGGCG
GAGGACGACA AAGCGGTCAG AAAGCTTTCC CGTCACGTGC TCGAACGTAA CGGTTACGAG
GTAATTGAAG CAGCCGATGG AAACGACGCG GTCAAAAAAT TTGCCGAGTC CGTCAACAAG
ATCGATCTCG TCCTGCTCGA CGTGGTGATG CCCGGCAAGA ACGGCCAGGT TGCCTTCGAG
GAAATGAAAC GAATCCAACC AGCTATCAAA GCCCTCTTCA TCAGCGGCTA CACCAAGGAC
ATCATCGGCA GCAAGGGTTT CCTGGCCGAA GATATCAATT TCATCGCCAA ACCGGTCAAG
CCTGATCAAC TGATCGCACG AGTACAGGAA GCATTGAAGA GCTGA
 
Protein sequence
MGMHDTLKQR HDSLGLRFFL LFASTIAVIS ISFTVLFYQQ QRRILRENVT HEGQILARLL 
AHNARLGVFA ENGELLKDPV EGILQHDGVL FVSVISAAGT PIREQAHEKM LKTPERKIPN
WSVHFSDTRS SRVPHTFEEA ELFEFWAPIV SIAPFQSTDA LILGHEAQGK EKILGYARII
VDKHPLKRRL DTLLLICSTL TGGFLVLSTI LTYLVVRRIT NPLDRLTVGI KALEQGGAFV
PVKVERNHEI GRLANAFNHM AETLKKREAE KELLAEELRH AQKMEAIGTL AGGVAHDFNN
ILTAIVGFGT LLQRSLNKDN PYQIYVDQIL NAADRATTLV KRLLAFGRKQ VITPLPTDLN
GIIQSIEKLL ARLVSEDVEF KVSLFNEPLV CHVDSGQIDQ ILMNLVTNAR DAMPSGGTLT
LTTDATVLNE NSFSSLEQCR PGRYAVLTVS DTGLGMDQET KERIFDPFFT TKEVGKGTGL
GLSMVYGIVR QHEGFVTVDS EPGAGTTFRI YLPIVALTAR HEEEAPPIVA KGNRETVLLA
EDDKAVRKLS RHVLERNGYE VIEAADGNDA VKKFAESVNK IDLVLLDVVM PGKNGQVAFE
EMKRIQPAIK ALFISGYTKD IIGSKGFLAE DINFIAKPVK PDQLIARVQE ALKS