Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1358 |
Symbol | |
ID | 2686452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1481813 |
End bp | 1484215 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637126033 |
Product | hypothetical protein |
Protein accession | NP_952411 |
Protein GI | 39996460 |
COG category | [S] Function unknown |
COG ID | [COG3410] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.908029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCGTTT ATTCCGCCAC AAAAGCCAGG TTCAAAGAAG ATGTCATGAC CAATGACATC GGCGGCATCA TCTTCAACGC CTTCCAGAAT GCAACGGGGC GAAGTACCGG CAGGGCCGAA ATCGAATCGT GGATGCACTC GCTGCAGTAT ATGGACCGAG TTCTCAGCGA CGATGAAATC CCCCACGACG CCGGCGTCGC CATCGAGTAC CACCTCCCTC AAACCTCCAA GCGTATCGAC TTCATCCTAA CCGGCCGGGA CAGGGACCGG CGCGAGTCGG CCATTCTCGT TGAACTTAAG CAGTGGCAGA AGGCGGAGCT GACCCAGAGT GACGCCATCG TTATTACCCG CTTCAAGCAC GGCACCGCCG AAACCCTTCA CCCCTCCTAC CAAGCCTGGT CTTACAAGCG CCTCCTTGAA GACTTCAACC AGACCGTACA AGAAGAACAT ATCGGTCTCT ACCCCTGCGC CTACCTGCAT AACTACGAAG ACGACGGGGT AATTACCCAT CCGTTTTACA GCGACCATAT CAAGCGGGCA CCGATTTTCC TCAAGCCCGA TGCCCTGAAA CTGCAGCAGT TCATCAAGAC TCACGTCAAA TTCGGCGATA CGACCCGGAT TATGTACCGG ATCGAGCACG GCAAGATCAA GCCGTCCAAG AACCTGGCCG ATGAGCTTGC TTCAATGCTC AAGGGCAACC GGGAATTCGT CCTGATCGAC GACCAGAAAG TGGTGTTCGA GAAGGCGAAA CGGTTGGCAG AGCAGGCATC GGAGCACACC AAAAAGGTCC TGATCGTCGA GGGAGGGCCG GGCACTGGTA AGTCGGTTCT AGCGATTAAC CTCCTGGTGG CGCTTACCGG CAAGGATCAT GTCGTCCAGT ACGTCACCCG CAACTCGGCC CCTCGGCTCG TCTACGAGGC CAAGCTTACC GGCCACTTCC GGAAAACTCA TATTTCCAAC ATGTTATCCG GTTCCGGCTC GTATCACGCG ACTCCACCCA ACACGTTCGG TTGCCTCATC GTGGACGAGG CGCACCGGTT GAACGAGAAG TCCGGAATGT TCAGCCACCT GGGGGAGAAC CAGATCAAGG AGATCATCAG CGCCAGCAGG CTGAGTGTCT TCTTCATCGA CGAAGACCAG AAGGTGACCC TGAAGGACAT AGGCGACAAG GAGGCGATCC GCACCTGGGC GGAGAAGCTA GGTGCCGAAG TCGTGGAGAT GAGCCTGGAG TCACAGTTTC GCTGCAATGG CTCTAACGGT TACCTGGCGT GGCTCGACAA TACACTGCAG ATTCGGGAGA CGGCCAACGA GACGCTGGAT ACCCGTGAGT ACGACTTCCG CATTGTTGAT AGCCCATCCG AACTGCACGG CCTGATCAAG GACAAGAACA AGATAAGTAA CAAGGCACGT ATGGTGGCAG GCTACTGCTG GGACTGGACC AGCAAGAAGA ATCCTCATTT GAAGGACATT GTCATTGGCG ACTACCGGGC GACTTGGAAC CTGGAGACAG ACGGCCAGGC GTGGATCATA AAGCCCGACT CCGTCAGCGA GGTGGGGTGC ATTCATACCT GCCAGGGGCT GGAGGTGGAC TACATCGGCG TCATCGTCGG GCCGGATTTG GTCGTCCGCG ACGGCAGTGT GCTGACCCGG CCGGCCGAGC GGTCGAGAAT GGACAAGTCG ATCCAGGGGT GGAAGAAGCT GCTCAAGGAT GATCCCGAAG GTGGCGCGGC GCGGCTAGAC GCCATCATCA AGAACACCTA CCGAACCCTC ATGACGCGCG GCCAGAAGGG ATGCTACGTC TACTTCACAG ACGAGGAGAC ACGCCGGTAC TCCGCCGAAC GGCTGCAGAT CGGGCCGGCA GCAGAGCAGG TTGCCGAGAA ACCGGTGCTG CCTGCAGACG AAGAAGCAGT GGTCCTGCCG TTCCGCCTTC TGGGGCCAGA GCAAGCGCGG CCATACGAGA ACTGCGTACC GCTCTACGAC TTCAAGATCG CCGCCGGCGG CTTCAGTGAC GAGCAACAGG TGGATGATTG CGACTGGGTT GAACTGCCGG AAGAATTCCG TCCAAGGAAA GGGCTGTTTG TGGCCCAAGT GGTGGGTGAG TCGATGAACC GGCGCATCCC GAACGGGGCC TGGTGCCTCT TCCGCATCGC CTCGGCCGGC TCACGGAACG GCAAGGTCGT CCTCGCCTCG CACCGGGAGA TAGCCGATAA CGATACCGGC GGACACTACA CCGTCAAGAT TTACGAGAGC ACGAAGGAGA GTTTTTCTGA TGGGACGTGG CGGCATGCGT CGATCATCCT GCGGCCGGAC AGTGCCTTGC CTGGGTATGA GCCGATTGTG TTGAGCGAGG AGCAGGCGGA GGATTTGCGG GTGATTGGGG AGTTGGTGGC GGTGCTGGGG TGA
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Protein sequence | MIVYSATKAR FKEDVMTNDI GGIIFNAFQN ATGRSTGRAE IESWMHSLQY MDRVLSDDEI PHDAGVAIEY HLPQTSKRID FILTGRDRDR RESAILVELK QWQKAELTQS DAIVITRFKH GTAETLHPSY QAWSYKRLLE DFNQTVQEEH IGLYPCAYLH NYEDDGVITH PFYSDHIKRA PIFLKPDALK LQQFIKTHVK FGDTTRIMYR IEHGKIKPSK NLADELASML KGNREFVLID DQKVVFEKAK RLAEQASEHT KKVLIVEGGP GTGKSVLAIN LLVALTGKDH VVQYVTRNSA PRLVYEAKLT GHFRKTHISN MLSGSGSYHA TPPNTFGCLI VDEAHRLNEK SGMFSHLGEN QIKEIISASR LSVFFIDEDQ KVTLKDIGDK EAIRTWAEKL GAEVVEMSLE SQFRCNGSNG YLAWLDNTLQ IRETANETLD TREYDFRIVD SPSELHGLIK DKNKISNKAR MVAGYCWDWT SKKNPHLKDI VIGDYRATWN LETDGQAWII KPDSVSEVGC IHTCQGLEVD YIGVIVGPDL VVRDGSVLTR PAERSRMDKS IQGWKKLLKD DPEGGAARLD AIIKNTYRTL MTRGQKGCYV YFTDEETRRY SAERLQIGPA AEQVAEKPVL PADEEAVVLP FRLLGPEQAR PYENCVPLYD FKIAAGGFSD EQQVDDCDWV ELPEEFRPRK GLFVAQVVGE SMNRRIPNGA WCLFRIASAG SRNGKVVLAS HREIADNDTG GHYTVKIYES TKESFSDGTW RHASIILRPD SALPGYEPIV LSEEQAEDLR VIGELVAVLG
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