| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1005 |
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| Symbol | |
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| ID | 2685628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 1085392 |
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| End bp | 1086369 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637125675 |
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| Product | dihydrouridine synthase family protein |
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| Protein accession | NP_952059 |
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| Protein GI | 39996108 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.667167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTT CTCTTACCAT AGGCTCCCTG ACCCTGGGAA ACAATCTCAT CCTCGCCCCC
ATGGCCGGGA TAACCAACCT TCCCTTCCGC CTCCTGGCCC GCGAACAGGG GGCAGGTCTC
TGCTTCACCG AGATGGTGAG CGTGAACGGC CTTGTCCGGG AAGGTAAAAA GAGTTTCGAA
CTCCTGCGGA GCGTGCCGGG GGATCGCCCC CTCGGCATCC AGCTTTTCGG GGACGACCCG
GACGTCATGG GCCGGGTGGC GGCCACTGTG GACGGATACG GGGACCTCAT CGACATCAAC
ATGGGATGCC CCGTGAAGAA GGTGGTGGGG ACCGGCGCCG GGAGCGCCCT CATGCGTGAG
CCGGACAAGG TGCGGGCCAT TGTCAGGGCC GTCCGGCGAG CCACGCGGCT GCCGCTGACC
GTGAAGATCA GGAGCGGGTG GAGCTGCGAA GATGCCAACT TTATCCAGAT TGCCCGGATT
GCCGAGGAAG AGGGATGCAA TGCAGTTACG CTCCATCCCC GGAGCAGGGC ACAGATGTTC
GAAGGCACGG CCGACTGGAC GAAGCTCGCC GAACTGAAGC AGGCCGTCGC CATACCGGTC
ATCGGCAGCG GCGACCTCTT CAGCGCGGCC GACGTGGCCG CCATGCTCGA CCGGACCGGC
TGCGACGGGG TCATGATCGC CCGAGGTGCT CTGGGAAATC CGTGGATCTT CAGGCAGGCC
CTGGACCTGA TGGCCGGACG CGAGCCGGCG GCGGCCTCCC CGGCCGAACG GTTGGCGGTG
GCCCGGAGGC ATCTGGCCCT GTTCACGGAA ATGGCCGGCG AACGGGTAGC CGCGAGAGAG
ATGCGCAAGC ACCTGGGGTG GTACTCCCAC GGACTCCCCG GTGCGGCACA GTTCCGGAAG
GAAATCAACG AGATTGAGGG CAATGGCGCC CTGATGGAAG CAGTGAGCCG CTTTTTCACG
GCTGTGGGGG CGCCATGA
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| Protein sequence | MIRSLTIGSL TLGNNLILAP MAGITNLPFR LLAREQGAGL CFTEMVSVNG LVREGKKSFE
LLRSVPGDRP LGIQLFGDDP DVMGRVAATV DGYGDLIDIN MGCPVKKVVG TGAGSALMRE
PDKVRAIVRA VRRATRLPLT VKIRSGWSCE DANFIQIARI AEEEGCNAVT LHPRSRAQMF
EGTADWTKLA ELKQAVAIPV IGSGDLFSAA DVAAMLDRTG CDGVMIARGA LGNPWIFRQA
LDLMAGREPA AASPAERLAV ARRHLALFTE MAGERVAARE MRKHLGWYSH GLPGAAQFRK
EINEIEGNGA LMEAVSRFFT AVGAP
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