Gene GSU0989 details

Gene Information

• Locus tag: GSU0989
• ID: 2685663
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1065932
• End bp: 1067824
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637125659
• Product: NHL repeat-containing protein
• Protein accession: NP_952043
• Protein GI: 39996092
• COG category: [S] Function unknown
• COG ID: [COG3391] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR02242] phage tail protein domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCACG GCCTCGACCG CCGTCTGGGG CTCGCGGGAC GCATCCGCCC CGACGCCCTG 
GTGGCTGATC GCTGCGGAAC GCTGATCATG CTGGCCGGCG AGCGCTTCTA TCGTCTGGAC 
CCCATGTCCG GCCGACTGGA GCGGATACCC TGTCTCGGCG GCAGGGGGGA CAGGGCGGGG 
GAACTGAGTG GACCCCGGGC CATGGCTCTG GGGAGCCGCA ATCTCTACGT GGCCGATACG 
GACAACAACC GGGTCTGCGT CTTTGCCACG GTTAACTGGC AGGTGCGCCG GTTTATCGGA 
GCCGAGAACC CGGCAGGGGA ACCGGCGGCC GGAACCGGTC CGGGGGAGTT CGACCGCCCC 
CTGGATCTGG CGGTGGACCC CTGCGACAAC CTCTATGTGC TCGATGCCGG CAACCGGCGC 
ATCCAGCGTT TCGATTACCA TGGCGAACCC GTGCCCCATG TGCCCCCCTT CGGCGCCGAC 
CGGCTGAAGC AGCCGGTGGC GCTGGCGCTG GGCCCGGCTC CCTCCCCGTC CGGCGGGGGG 
GCCCTGGTCC ACTGCCTCGA TACGGGGCTC ACCGCCATCG TTACCTTTGA CGACCAGGGC 
CGGTTCCTGG GCACCGTCGG CCTGGACGAC CTCGGCTTCG AGCCTGCCGG TCTGGCGGTG 
GACGCCGACG GCAAATGGTA CGTCTCTGAT CGGGAGCGGT TCATCTATGC CATCAGGTCG 
GCAGGTGACT GGAGCCCTCT GGAGGAGTAC GAGGGGAAGG CCCTGCGGCT GTTCGCCGGT 
CCCGGCGGGG AGTTTTACGC CCTGGAAGAT GGGGAGGTGG CCCGCCTCAC CCGTCGCCGT 
CGCTATCCGC CGGCAGGCTC GTGGACCGGC AGCGGCCCGG TAACGGGCAT CTACACTTCC 
CGCTCATTCG ATACCGGCGA CGGCCGCCTC TTCTGGCACC GGGTGACGCT GGACGCGACG 
GTCCCCCCAA AGACCCAGGT GCGACTTTCC TACTTCATCT ACGAAACCGG CCGCGATCCG 
GAGCTCCTGC CGGCCGACGG CGAGTGGCGA AGTTTCCCGT CCAATCCGGC CGACGCCCTT 
TTTGAGCGGA AGGAGGGACG GTATCTGAGG GTGCGCCTGG AACTGATCTC CGAAGACCGG 
CATGCCACCC CCACAGTGGT GAGCCTCCGC CTCCAGTTTC CCAAACAATC GTATCTCCGC 
TACCTTCCGG CCGTCTTCCA GGACGACGAG CGGGGGCGTG ATTTCCTGGA GCGGTTTCTT 
TCCCTGTTCG AGAGCGTCCT TTACGACCTG GAGCGCGAAA TATTCACGAC CCGGCGCTAT 
GCCGACCCCT GTGCCGTACC GGCCGGCTTC CTTCCCTGGC TCGCCTCGTG GCTGGCGCTC 
CCCGATGCGG ACCAGTGGCT CGAAGATGGC GGGGCACGGC TGCGCACACT GATCGCCCGG 
GCCAATGAGC TGTACCGTTG TCGGGGCACC CGGGGTGGAC TGGCGGAACT CATCACTCTT 
TACACCGGCA AGGAACCGTG GATTGTGGAG GCGTTCCAGT TGGACCGCAT CCGGGGCCGG 
AGCGAGTGGC GCGAAACCAT GAGGCTCTTC GGGGAAGATC CCTACCACTT CACGGTTCTC 
CTGCCGCCGG GCGGCGCAGG GAGGACCGAA ACCGTAAAGC GGATCGTGGC GCGCGAGCGC 
CCGGCCCACA CCTGTGCCAC GGTAGTTGCC CTGGAGAACC TGTTCCGGCT TGGGGGGCAC 
ACCTACCTGG AAGTCAATAC CAACCTGAAC CAGCCCCTCT TTGCCCTGGA GACCTCCTCG 
TCGCTCGCCC GGCAGACCTA TCTGGCCGAC GGCGAGAAGG CGGGGCAGGC GCAGGTCCGG 
GCGCGACAGG GCATGGATAC ATTGTTTGAG TGA 

 

Protein sequence

MVHGLDRRLG LAGRIRPDAL VADRCGTLIM LAGERFYRLD PMSGRLERIP CLGGRGDRAG 
ELSGPRAMAL GSRNLYVADT DNNRVCVFAT VNWQVRRFIG AENPAGEPAA GTGPGEFDRP 
LDLAVDPCDN LYVLDAGNRR IQRFDYHGEP VPHVPPFGAD RLKQPVALAL GPAPSPSGGG 
ALVHCLDTGL TAIVTFDDQG RFLGTVGLDD LGFEPAGLAV DADGKWYVSD RERFIYAIRS 
AGDWSPLEEY EGKALRLFAG PGGEFYALED GEVARLTRRR RYPPAGSWTG SGPVTGIYTS 
RSFDTGDGRL FWHRVTLDAT VPPKTQVRLS YFIYETGRDP ELLPADGEWR SFPSNPADAL 
FERKEGRYLR VRLELISEDR HATPTVVSLR LQFPKQSYLR YLPAVFQDDE RGRDFLERFL 
SLFESVLYDL EREIFTTRRY ADPCAVPAGF LPWLASWLAL PDADQWLEDG GARLRTLIAR 
ANELYRCRGT RGGLAELITL YTGKEPWIVE AFQLDRIRGR SEWRETMRLF GEDPYHFTVL 
LPPGGAGRTE TVKRIVARER PAHTCATVVA LENLFRLGGH TYLEVNTNLN QPLFALETSS 
SLARQTYLAD GEKAGQAQVR ARQGMDTLFE