Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0924 |
Symbol | |
ID | 2685284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 993208 |
End bp | 993978 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637125594 |
Product | ABC transporter, permease protein, putative |
Protein accession | NP_951978 |
Protein GI | 39996027 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTGA CCTCCATTGA ACACACCGTC AAAAGCTTCC TCGCCGAATT CCAGGCGTTC TGCGTCCTGT CGCTCAGGGC CGTGGTGCGC ATCTTCCGCC GCCCCGGCTA CTACCGGGAA TTCGTCATCC AGTTCGACAA GATGGGCGTC GGCTCCCTCT TCATCATCTG CCTCACGGGA CTGTTCACCG GCATGGTCAT GGCGCTCCAG GCCCTGATCC AGCTCAAGCC CTTCGCCGCC ACCAGCTACG TGGGGGGGAT GGTGGCGGTA ACCATGGTAA AGGAGCTGGG GCCGGTCCTC TCGTCCCTCA TGGTCGCGGG CCGGGTCGGC TCGTCCATCA CCGCCGAGCT GGGCACCATG GTGGTGACCG AGCAGGTGGA CGCCATGCGG GTGGAGGGGA CCGACATCGT CAGCCGGCTG GTCACCTCCC GCCTCAAGGC ACTGATGCTG GCCATGCCCA TGCTCGCCCT GGTCACCGAC GCGGTGGCCC TGCTGGGCGG GTACATCATT GCGGCGGGGT ATGACATCAA CCTCCTCATG TACTGGAAGT CACTGCCCCA GTTCATGGTG TTCCAGGACC TCATCGAGGG GGTGATGAAA CCCTTTGTCT TCGGTACGCT CATCGCGCTC ATCGGCTGTT ACGTGGGGCT TTCCACCAGC GGCGGCGCCG AGGGGGTGGG GACGTCGGCC AAGCGGGCAG TGGTTCTCTC ATCGGTCATG GTGTTGGTGG CCGATTTTTT CATGACCAAG ATATTTATTG TGTTCCGGTG A
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Protein sequence | MPLTSIEHTV KSFLAEFQAF CVLSLRAVVR IFRRPGYYRE FVIQFDKMGV GSLFIICLTG LFTGMVMALQ ALIQLKPFAA TSYVGGMVAV TMVKELGPVL SSLMVAGRVG SSITAELGTM VVTEQVDAMR VEGTDIVSRL VTSRLKALML AMPMLALVTD AVALLGGYII AAGYDINLLM YWKSLPQFMV FQDLIEGVMK PFVFGTLIAL IGCYVGLSTS GGAEGVGTSA KRAVVLSSVM VLVADFFMTK IFIVFR
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