| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0858 |
|---|
| Symbol | |
|---|
| ID | 2685426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 917583 |
|---|
| End bp | 918464 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637125531 |
|---|
| Product | TonB-dependent receptor, putative |
|---|
| Protein accession | NP_951915 |
|---|
| Protein GI | 39995964 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00190793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA ACTACGTCGA AAAATCGTTT CTATATCTCC TGATTCTTTC CCTTCTCCTT
CATGCGGGCG TGTTCGCCCT TTTTCTCGTT TTCCCGCAGC AGAGGCAGGT GGTTCGCCAG
GAGCCGATCA TGATCGACCT GGAAGACATC CCCGATCTGT CCCCCCAGCC GCCGGCGACC
GACAGGAAGG AGGCCCGGCG CTTTGCCGAG GATCGGCACC GTGTCCCCCG GGAAATGGCC
CCTCGCGGCG ATATGGACCG GGACCGGATT GCTTCGCTCC CCTCGCGGCA GCAGCCGCGG
ATGGTTCCCC GGCCTGCCCC GGCACAGCGC GAGCCGACGG CCCGTGAGCC GGCGCCGTCT
CCCGGCGATA TCCCCGTGCG GGAGCCCTCC CAGGGCGGGG GCGGTGTCCT GAGGCCGCGG
ACCAGGGGGG AGAATCTGCC GGAGATGGCC CAGCTCATGC CGAGCGCGGA GCGGCTGGCA
AAGATCGAGG ATAACTATAG AAAAAGATTC AGCGAGGATG TGGCGGAGGG GGACACCAAG
TTTCTCGATA CCGACGACAT CCAGTTCGGC TCGTTCCTGC GCCGTTTCGA GAATGCCGTC
TACGGCGTCT GGCGCTACCC GGCCGATGCG GCGCGATTGG GCATTGAGGG CGTTGTGCCG
GTGAAGATCA CCTTTAATCG CTCGGGTGAG ATCGAGAAGT ACGAGATCCT GCAGGGTTCG
GGGAGCCGCA TCCTCGACGA CGAGGTGGGG CGGACCCTTT CTACCATCAA GAGGGGGGGC
ACGGTGGGGG GCTTCCCCCG CGGCTACACC AAGGATCACT TCCACCTGGT CGCCTTTTTC
CAGTACGGCA TCGTGCGGGG CGCCAGCCGT TCGCTCCGCT GA
|
|---|
| Protein sequence | MPDNYVEKSF LYLLILSLLL HAGVFALFLV FPQQRQVVRQ EPIMIDLEDI PDLSPQPPAT
DRKEARRFAE DRHRVPREMA PRGDMDRDRI ASLPSRQQPR MVPRPAPAQR EPTAREPAPS
PGDIPVREPS QGGGGVLRPR TRGENLPEMA QLMPSAERLA KIEDNYRKRF SEDVAEGDTK
FLDTDDIQFG SFLRRFENAV YGVWRYPADA ARLGIEGVVP VKITFNRSGE IEKYEILQGS
GSRILDDEVG RTLSTIKRGG TVGGFPRGYT KDHFHLVAFF QYGIVRGASR SLR
|
|---|
| |