Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0842 |
Symbol | |
ID | 2685412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 898971 |
End bp | 901334 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637125514 |
Product | sensory box histidine kinase/response regulator |
Protein accession | NP_951899 |
Protein GI | 39995948 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.220519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGC CGTCGGTCTG CGGTGCAATC ATCATGTATT CTCCAAGACA AAACGGTAGG CCCGGAAAAG ACGATCCCAT GCCCATAACG ATTCCTTCTG TGTTCAAAGC AAGACTGACT CCCCTGTCGA TCGCGCTCAT CTATGCCCTG GCCGGCGGAG CGTGGATGGT GGTGGCGAAT GCCCTGATCG GCACCCTATT CGGGGGGCAG CCAGTGGCGG CGTGGCTGAC CGCGTTGAAC GGGGTGCTTC TGATTGGCGT GTCGGCGGTT CTGCTGTTTC TGCTGGTCCG CCGCAGAGAA GCGACCATCA TACGCTCGCA GGAGTCGCTG CGGAGAACCA ACCGTGCGCT TGCGACCCTC AGCGAGTGCG ACCAGGCTCT CCTGCGTGCC GACGACGAGC AGGGGTTCAT CAAGGATGTA TGCCGGATTG CGGTGGAACA CGGAGGGTAT CGTCAAGCAT GGGCCTGGTT TGCGGAGGCC GATGGAGTGG CATCGGTGCG GCCGGTGGCG TGCTGGGAAA GTACGGTTAC GGATGCAAAG TTTCAACTCG ACTCGGACAT GGGACAGGGG ATGGCACGGG AAGCGCTCGC TGCCGGCGTT CATGTCGTGC GGAACATCAA TGCCAGACAG GGTGCCGGCG AACTCTTCAG GCGCATCACC TCTTCCGTGC TATCGCTGCC GCTGTCCGAC GACGAAGGGG CCTTCGGCGC CCTCGTCATA TACGCCGACG GTGCCGACGC CTTTGCCCCG GAAGAGGTCG AGCTCTTGCG GAAGCTGGCC GGCAACCTCG CGCATGGGAT TACGACGCTC CGGGTTCAGG CCGAGAAATG CCAGCTTGAA AAACAGCATG CGGTTCTCGC CGCTGTTCTT GACCAGTTCA TGCAGGGGGT TGTCCTTTTT GCCCCCGACG GGCTGATACG CTACGTCAAT CAGGCATTTG AACGAATCAG CGGGACAGAC CACGCCGGTA TCATCAATAA GCGCATTCAC AACTACGGCA AATCGCTCTT CGGATCTCCA TTCATTCAGG CACTGACCGA CGTTGTCGCC CAGGCGAGGA CGCGAACCGG AAGATATGTC ATCGTACGGG ACGACGGCAG CAATGTGGAT GTCGAGGTAA TTCTTTCCCC GGTCAGGGAG ACGTCCGGCA CCGTCGCAAG CTATGTTGCC ATTGTCCGTG ACGTGACGCC GGAGATGCAG CTGGAAAGCC AATTGCGCCA CGCACAGAAA ATGGAAGCCG TGGGGACACT GGCCGGAGGG ATCGCCCATG ATTTCAACAA TATTCTGGGG GCCATAATTA TCAGTACCGA GTTGGCTCTT GATGACGCAA AAGAGGGGGC AAGCAACCCG GAGCTGCTTG AAATAGTGCT CAATGCGGCC GAACGCGGCA GGAACCTGGT CACGCAGATT CTCGCCTTCA GCAGGCAAGG CGAGCAAAAA CGGCAAACGG TGCGAATAGC CCCGATCGTA AAGGAATGCC TGAAACTGCT GCGGGCTTCC CTGCCAACAA CCATCGACAT TCGTCCCACC ATCTCCTGCG AAGACGCAAT GGCTTCGATC GACCCGACCC AGATCCATCA GGTCATCGTG AACCTTTGCA CCAATGCGGC CCATGCGATG CACGGCAAGG TGGGGATGCT CGAAGTCACC CTGACCGCGG TCACCCTCCA TGATGATATA ACCGGCACTC ATCCCGACCT GCATGCCGGC CCCTATGTGG AACTTTCGGT CAAAGATACG GGACACGGCA TGGGAAGCGA GGTTCTGGAG CGTATCTTCG ATCCGTTTTT CACCACGAAG GAGCAGGGAC GGGGAACAGG ACTGGGTCTG CCCGTTGTCT ATGGTATCGT AAAGGACCAT GGCGGGGGGA TCGTGGTGGA GAGCGAGCCC GGCAGCGGAA CGACCGTGCG GGTCCTGATT CCGAGGGCGG AACAGATCGA GGAACAGCCG GAGGCCGCGC CTGACGGTGC ACCCGCCGGG GGGGACGAGA GGATTCTCTA TGTGGATGAC GAAGAAGACC TGGTCGCCAC CACCGGCGAG ATGTTACGGC GGCTCGGCTA CGACGTTGTT GCCACCACGG GCAGTGTCGA AGCGCTGAAG CTGTTCACCG CTCAACCCGG GCTCTTCGAC CTGATTATCA CCGATCAGAC CATGCCCCTG CTGACCGGAA CGGAACTGAC CCGTGCACTA CGCCGCCTTC GGCCGGATGT GCCGGTTCTG CTTTGCTCCG GCTTTATCGA CCAGGATGAA CGAACGATCC TTGAACAAGC CCGTTCGGCA GGCATTGCCG ACGTCCTGCG GAAGCCGGTT GACAGAGACG AAATGGCCCG GGCTGTTCGA CGGATATTGG ACAGGAGAGT ATAA
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Protein sequence | MNPPSVCGAI IMYSPRQNGR PGKDDPMPIT IPSVFKARLT PLSIALIYAL AGGAWMVVAN ALIGTLFGGQ PVAAWLTALN GVLLIGVSAV LLFLLVRRRE ATIIRSQESL RRTNRALATL SECDQALLRA DDEQGFIKDV CRIAVEHGGY RQAWAWFAEA DGVASVRPVA CWESTVTDAK FQLDSDMGQG MAREALAAGV HVVRNINARQ GAGELFRRIT SSVLSLPLSD DEGAFGALVI YADGADAFAP EEVELLRKLA GNLAHGITTL RVQAEKCQLE KQHAVLAAVL DQFMQGVVLF APDGLIRYVN QAFERISGTD HAGIINKRIH NYGKSLFGSP FIQALTDVVA QARTRTGRYV IVRDDGSNVD VEVILSPVRE TSGTVASYVA IVRDVTPEMQ LESQLRHAQK MEAVGTLAGG IAHDFNNILG AIIISTELAL DDAKEGASNP ELLEIVLNAA ERGRNLVTQI LAFSRQGEQK RQTVRIAPIV KECLKLLRAS LPTTIDIRPT ISCEDAMASI DPTQIHQVIV NLCTNAAHAM HGKVGMLEVT LTAVTLHDDI TGTHPDLHAG PYVELSVKDT GHGMGSEVLE RIFDPFFTTK EQGRGTGLGL PVVYGIVKDH GGGIVVESEP GSGTTVRVLI PRAEQIEEQP EAAPDGAPAG GDERILYVDD EEDLVATTGE MLRRLGYDVV ATTGSVEALK LFTAQPGLFD LIITDQTMPL LTGTELTRAL RRLRPDVPVL LCSGFIDQDE RTILEQARSA GIADVLRKPV DRDEMARAVR RILDRRV
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