| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0080 |
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| Symbol | degQ |
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| ID | 2687866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 91907 |
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| End bp | 93322 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637124746 |
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| Product | protease degQ |
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| Protein accession | NP_951142 |
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| Protein GI | 39995191 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTCC GTCGTCTGCT ACTGATATCG TTGGTCTTTG TCACAACTCT CACCGCCTGC
TCGAAGAAGG AAGAAAAGCT CTTCTATGAG TCGGGCCGTG CCGACGCGCC GGTCAAGGAG
GTTCCCAGAG ACATCCTTGC CACCCAGCAG GCCTTCGTCG AGCTGGTCAA GAAGGTTACT
CCGTCGGTCG TGAACATCTC CACCGTCAGC CGGAGAAAGA TCGAGCAGCC CTTCTTCGAG
TTTTCCCCCT TCTTCAATGA TTTCTTCGAC AATCGCCCCC GGTTCCGGCG GGAACAGAGC
CTCGGCTCTG GCTTCATCAT CAACCGGGAA GGGTACATCG TCACCAATGA CCATGTGGTG
CGCGACGCCG AAAGCATCAA GGTCAAACTC TCCAATGAGA ACGTCTACGA CGGCCACATC
GTCGGCAGCG ACCCCAAGAC CGACATCGCG GTCATCAAGA TCGACTCGCG GGAGGAACTC
CCCGTGGCGG TCCTGGCCGA TTCGGACAAG CTTCAAGTGG GGCAGTGGGC GGTGGCCATC
GGCAACCCCT TCGGCCTGGA CCGGACCGTG ACCGTCGGCG TGGTGTCGGC CACCGGCCGG
TCCAACATGG GAATCGAGAC CTATGAAGAT TTCATCCAGA CCGACGCCTC CATCAACCCG
GGCAATTCGG GGGGGCCGCT GCTGAACGTC CACGGCGAGG TGATCGGCAT CAACACCGCC
ATCGTGGCCG CCGGTCAGGG GATCGGCTTT GCCATCCCGG TCAACATGGC AAAGCAGATC
GTAACTCAGC TCATCACCAA GGGCAAGGTC ACCCGCGGCT GGCTCGGCGT TACCATTCAA
CCGGTCACCG ACGATCTTGC CAAGGAATTC GGCCTGAAAA AGGCCCAGGG CGTCCTGGTG
AGTGATGTGG TTAAGGGGAG CCCCGCTGCC GGCGCCGGTA TCCGGCAGGG GGACATCATC
CTCAGGTTCG CCGGCAAGGA GATCAAGGAT GCCCAGCACC TCCAGCGGGT GGTGGGCGAC
ACGGCGCCGG GGACAAAGGT GCCGGTGGTG GTCTTCCGAG AAGGGAAAGA GGTTCAACTC
TCCCTGGCGA CGGCCAGTTC CGACAGTGCC CAGGCACGCC AGGCGCGCCC TCAGGGAGGG
GCGCCCGACA CCCTTGGCCT CGCCGTGGAG GAACTACCCC GCGAATACCG TCAGGAAGGT
TTCACCGGCG TCCTGGTGGT CCAGGTGGAT GATGGGAGCG CCGCCGGCGA GGCGGGCATC
CGGGAGGGGG ACGTGATCGT GGCGGTGAAC CGGCGGCCCG TGGCGAACCT GGCAGAGTAC
GACCGCGTCA TGCGCGAGGC GGCCCGGCGC GGTTCGGTAG TGCTTCTGGT GCGACGAGGC
GAGGCGAGCA TCTATTTCTC CCTCAGGCTC AGGTAG
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| Protein sequence | MFVRRLLLIS LVFVTTLTAC SKKEEKLFYE SGRADAPVKE VPRDILATQQ AFVELVKKVT
PSVVNISTVS RRKIEQPFFE FSPFFNDFFD NRPRFRREQS LGSGFIINRE GYIVTNDHVV
RDAESIKVKL SNENVYDGHI VGSDPKTDIA VIKIDSREEL PVAVLADSDK LQVGQWAVAI
GNPFGLDRTV TVGVVSATGR SNMGIETYED FIQTDASINP GNSGGPLLNV HGEVIGINTA
IVAAGQGIGF AIPVNMAKQI VTQLITKGKV TRGWLGVTIQ PVTDDLAKEF GLKKAQGVLV
SDVVKGSPAA GAGIRQGDII LRFAGKEIKD AQHLQRVVGD TAPGTKVPVV VFREGKEVQL
SLATASSDSA QARQARPQGG APDTLGLAVE ELPREYRQEG FTGVLVVQVD DGSAAGEAGI
REGDVIVAVN RRPVANLAEY DRVMREAARR GSVVLLVRRG EASIYFSLRL R
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