| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0020 |
|---|
| Symbol | |
|---|
| ID | 2688601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 31533 |
|---|
| End bp | 32072 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637124682 |
|---|
| Product | hexapeptide transferase family protein |
|---|
| Protein accession | NP_951082 |
|---|
| Protein GI | 39995131 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0945686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCC CCTTCAAGGG AATGAGCCCG CAAATCGATC CGTCCGCGTT CATTGCCGAC
ACCGCCGTTG TCATCGGCGA CGTGACCATC GGCCCCGAAA GCAGTATCTG GTACAACGTG
GTTGCCCGAG GCGATGTCAA TTTCATCCGC ATCGGCGCCC GGAGCAACAT CCAGGATCTC
TCCATGCTCC ATGTGACCCA TAAAAAGCAC GCCGACGACC CGGGAGCCCC CCTTGTCATC
GGCGATGACG TGACCGTCGG CCACAGCGTG ACCCTCCACG GCTGCACCAT CGGCAATGGT
GCCTTCATCG GCATGCAGGC AATGGTCATG GACAAGGCGG TGGTGGGCGA AGGAGCACTC
GTAGGCGCAC GGGCACTGGT GACCGAGGGA ACCGTCATCC CGCCCCATAC CCTCTGGGTT
GGGGCACCGG CAAAGTACAA GCGCGACCTG ACCCCCGACG AAATTGCCTG GCTGAAGCGC
TCGGCAGGCA ACTACGTGCG CTACTCACGG GAATATCTTG AGGAAGACGC GGACCGCTGA
|
|---|
| Protein sequence | MIRPFKGMSP QIDPSAFIAD TAVVIGDVTI GPESSIWYNV VARGDVNFIR IGARSNIQDL
SMLHVTHKKH ADDPGAPLVI GDDVTVGHSV TLHGCTIGNG AFIGMQAMVM DKAVVGEGAL
VGARALVTEG TVIPPHTLWV GAPAKYKRDL TPDEIAWLKR SAGNYVRYSR EYLEEDADR
|
|---|
| |