Gene GSU0002 details

Gene Information

• Locus tag: GSU0002
• Symbol: recF
• ID: 2686552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 2793
• End bp: 3890
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637124664
• Product: recombination protein F
• Protein accession: NP_951064
• Protein GI: 39995113
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACCTGA ACGCAATTGC CATCAGCGCC TTCCGCAATA TCGATCATGT GGAAATCTCA 
TTCGATCGGC GGTTCAACGT CCTGCACGGC GCCAATGGAC AGGGAAAAAC GTCGGTGTTG 
GAGGCCATTT ACCTCCTGGG GACCATGAAA TCGTTCCGGA TGGCCAAGGC CCATGATCTC 
ATCGCCTGGA ACGCCCCCCA CTCACTGGTA CGTGGCGATA TCGACAAGGC GGGGGTCAGA 
CGTGAGATAG CCCTCTATCT CGGCCGCGAG GGCCGTAAGG CCCGCATTGA CCGGAAACCG 
GTCACCAAGC TTGCGGATTT TTTCGGCGCC GTGAACGCCG TGGTATTTTC TCCAGAGGAG 
ATAGGCATGG CCCGCGGAGG GCCAGAACTC AGACGCCGCT ACCTGGACCG GGCCATCTTC 
AACGGCGACT TGGGGTACCT GCTCCTCCAC CATGAGTACC ATCGGCTGCT CAAGCAGCGT 
AATGCTCTGC TGAGGCGGGG CGAACGGGAT GGATTGGAGG TCTGGACAAT CCAGCTGGCC 
GAGGCCGGCG CCCGGCTCAT GGTAAAGCGA AGGGCCTACC TTTCTCAGAT AGAGCCGCTG 
GTACGGCAGT TTTACCGGGA TATTGCCGGT GCGGGCCAGG AGGTGGGACT TGCCTATCGC 
TGCCACGGAC TGGCATCCGC CGAGGGCGAA CGCGATTGTG CAGCGGCCCT CCGGGAGCTC 
ATGGCAGCCC ATGAGGCCGA GGAACTGCGC CGGGGGGCCA CTGGCGTAGG CCCCCACCGG 
GATGACGTGG ATTTCATCCT GAACGGTCGG GTCATCCGCC ACCACGGCTC CCAAGGGGAG 
CAGCGGAGCT TTGTCCTGGC CGTAAAAATG GCCGAGATCG AGTACCTGGA GCGGCTCAAC 
GGTGCGCCGC CGGTGCTTCT GCTGGACGAC ATCTCATCGG AACTGGATCC CGAGCGCAAC 
GCGAACCTGA TGACCTTTCT CCGGGGAAAA CGGATGCAGG TCTTCATAAC CACCACCGAT 
GTATCAACCC TCCGTCTGGA GGGGATCGAC ACCCACGCGT CGTTTCGCGT TTCACGTGGA 
ACGGTGACGC CTGTATAG 

 

Protein sequence

MHLNAIAISA FRNIDHVEIS FDRRFNVLHG ANGQGKTSVL EAIYLLGTMK SFRMAKAHDL 
IAWNAPHSLV RGDIDKAGVR REIALYLGRE GRKARIDRKP VTKLADFFGA VNAVVFSPEE 
IGMARGGPEL RRRYLDRAIF NGDLGYLLLH HEYHRLLKQR NALLRRGERD GLEVWTIQLA 
EAGARLMVKR RAYLSQIEPL VRQFYRDIAG AGQEVGLAYR CHGLASAEGE RDCAAALREL 
MAAHEAEELR RGATGVGPHR DDVDFILNGR VIRHHGSQGE QRSFVLAVKM AEIEYLERLN 
GAPPVLLLDD ISSELDPERN ANLMTFLRGK RMQVFITTTD VSTLRLEGID THASFRVSRG 
TVTPV