Gene DET1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1642 
Symbolfmt 
ID3229151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1468750 
End bp1469688 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content57% 
IMG OID637121199 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_182335 
Protein GI57233688 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAC TCAGGATTGT TTTTATGGGC AGCCCCGAAT TTGCCCTTAC TCCGCTTAAG 
ATGCTCCTTG CCGAAGGATA CGCTATCTGC GGGGTTTACA CCCAGCCTGA CCGTCCGGCC
GGGCGGGGGC GTGAGCTTTG TCCTCCCCCG GTAAAGGCGC TGGCACTGGA ACGCGGGCTG
GCGGTTTACC AGCCCCAAAG CCTCAAGAAA CCCGAAGAGC AGGCAGTCTT AAGCGGGCTT
AAGCCGGATG TAATAGTAGT GGCGGCTTAC GGCCTTATCT TGCCCCAGGC GGTGCTGGAT
ATACCCGCAT ACGGGGTCTT AAATATCCAC CCCTCCCTGC TCCCCCGTTA CCGCGGGGCA
ACCCCGGTGG CCGCTACCCT GCTGGGGGGT GACGAATGGG CCGGCGTTTC CCTGATGAAA
CTGGAAGCCG GGCTGGATAC CGGGCCGGTT TATTCCCGGG CTGCGATACC TGTCCGCCCG
GAAGATACCA CACCTCTTTT GGCTGACAAA CTGGCCTTTA TCGGCGGCTG TCTGCTTTTA
GAATTATTAA GCCGGATTCC CTCTTTGCCC CAGCCGGAGC TTCAGGATAA TGCAAAGGCC
ACTTATTTCG GTATGGTCAC CAAGGACATG GGGCAGGTAA ACTGGCAGAC TCCGGCAGCG
GAGATTGAGC GGCGGGTGAG GGCGTTTTTC CCCTGGCCGG GTGTTTTTAC TTCGTATAAC
CAAAAGACCC TGAAAATACT GGAAGCAAGA CCCCAAAAGC TGGGTTTGGG CTTACAGCCG
TCTCAGGTCA GGGTTTATGA GGGTGACAGA ATAATGGTCG GCTCAGCTTC GGGAGAGCTT
GAGATAATAC GGCTTCAGCT GGAGGGCAAG GCCGCCTGCT CTGCGGCAGA TTTCCTGCGC
GGTCAGCGCC ACTTTGACGG GGTTAATCTG GGGGTTTAG
 
Protein sequence
MNELRIVFMG SPEFALTPLK MLLAEGYAIC GVYTQPDRPA GRGRELCPPP VKALALERGL 
AVYQPQSLKK PEEQAVLSGL KPDVIVVAAY GLILPQAVLD IPAYGVLNIH PSLLPRYRGA
TPVAATLLGG DEWAGVSLMK LEAGLDTGPV YSRAAIPVRP EDTTPLLADK LAFIGGCLLL
ELLSRIPSLP QPELQDNAKA TYFGMVTKDM GQVNWQTPAA EIERRVRAFF PWPGVFTSYN
QKTLKILEAR PQKLGLGLQP SQVRVYEGDR IMVGSASGEL EIIRLQLEGK AACSAADFLR
GQRHFDGVNL GV