| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1267 |
|---|
| Symbol | |
|---|
| ID | 3229423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1154042 |
|---|
| End bp | 1154977 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637120829 |
|---|
| Product | degV family protein |
|---|
| Protein accession | YP_181979 |
|---|
| Protein GI | 57233958 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGTAA AAATAGTCAC TGACAGCACC GTGGATTTAC TCCCGGAAAC TATAAAAGAA
CTGGGCATAA CGGTAGTGCC GGTATATGTA ATGTCCGGCA ACAAGACCTA CAGGGACGGG
CTGGATATCA GCCAAACCGA AATCTACAAC CGTATGCTTG AGGGCGAACA GTTCACCACC
TCCCAGCCTA CCCCGGCTGA TTTTGCCAAT GCATATAAAA CACTTTCAAA GGAAACTGAC
CAGATAGTCT CCCTGATTAT GGGTGCCAAA CTATCAGGCA CTTATAATTC GGCGTTGCAG
GGGCGTGAAC TGGCACAAAG CAGCAGCAAT ATAGAGCTGA TAGATACCAA GGCTACTTCC
GGGGCTTTGG GTTTGCTGGC TACCCAGGCG GCTGAAATGG CAAAAATGGG TGAAAGCGCC
GGGAATATAG TAAACAGCAT CAAGAGCTAT ATCCCCCAGG TACATATCTG GGCTTTGCTG
GATACCATAA AATATGTGCT GAAGAGCGGG CGTCTCAGCA GCGCCTCCAA CCTTATCAGC
GGGGTTTTGA GTATCCGCCC CATGCTTACC CTTAGAGACG GCTCTCTCTG GCCGGCCAGT
ATCCACCGCA CCCGCAATAA AGGTATTGAA AAACTGACCG AACTGGTAAA AAATAACCGC
AATCTGGAAG CAGTCCAGAT TGTCCAAAGC GTAGATTTGG CAGAAGCCCA TGGTATAAAG
GAAAAGCTGG CTGATTTTAT TGACCAGAGC AAAATCCATA TCTCACAGCT TGGGCCTGCT
TTGGGTGTCC ACGGCGGCCC CGGCACTTTG GTAGTGGCTA TCAGGGAAAA GCTGAGCGGT
ATAGGCACAG CGTCTCCAGA CGAAACGGAA GACAAGAAAT CATTTAAGCT GCCCTCTATC
CACCTGCCCA AGCTGGGCTT TTCCAGCCTG CACTAG
|
|---|
| Protein sequence | MSVKIVTDST VDLLPETIKE LGITVVPVYV MSGNKTYRDG LDISQTEIYN RMLEGEQFTT
SQPTPADFAN AYKTLSKETD QIVSLIMGAK LSGTYNSALQ GRELAQSSSN IELIDTKATS
GALGLLATQA AEMAKMGESA GNIVNSIKSY IPQVHIWALL DTIKYVLKSG RLSSASNLIS
GVLSIRPMLT LRDGSLWPAS IHRTRNKGIE KLTELVKNNR NLEAVQIVQS VDLAEAHGIK
EKLADFIDQS KIHISQLGPA LGVHGGPGTL VVAIREKLSG IGTASPDETE DKKSFKLPSI
HLPKLGFSSL H
|
|---|
| |