Gene DET1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1200 
SymbolpyrC 
ID3229515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1095090 
End bp1096373 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content54% 
IMG OID637120763 
Productdihydroorotase 
Protein accessionYP_181913 
Protein GI57234049 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0100135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TGATTAAAAA CGGGCGCATC ATAGACCCTG CCGGAGGCAC AGATAAAGTG 
GCAGACCTGC TGCTGGAAAA CGGGCTGGTT GCCGGAATAA ACAGTAATAT ACCTTCAGAT
AAAGCTGATG AAGTTATAGA TGCCGAAGGC AAAGTGGTTT GCCCCGGTTT TATAGACCTG
CACGTACACC TGCGTGAGCC GGGTTTTGAA GGCAAAGAGA CTATTGAAAG CGGCTGCAAG
GCCGCCGCAG CCGGAGGGTT CACTACCATC TGCCCCATGC CTAATACCAA TCCCGCAGCG
GATAATCTGC CGGTGATAGA CTTTGTTAGA AACACCGCCG CCAAGGTTTC GCCCATACGG
GTGCTGCCCA TAGCCGCCAT TACCAAAGGG CGCAAAGGAC AGGAGCTTTC CCCCATGGGA
GAGCTGGCCG AAGCAGGAGT GGCCGGTTTT TCAGATGACG GTGACTACGT GTCAAACAGC
TCCATGCTCC TCCATGCCCT GCTTTACAGC CGCACTTTTG GCCTGCCCGT TATGGAGCAC
TGCGAAGAGC CGTGCCTGGC GGAAGGCGGG GTAATGAACG AAGGTCTTTT AGCCTGCCGT
TTGGGATTAA AGGGCATACC TGATGCCGCT GAAGAAATTG CCCTGAGCCG GGATATTGCC
CTGGCCAAAG AAAGCGGCGG GCAGCTGCAC CTTTGCCATA TCAGTACGGC CGGTTCGGTG
GAACTGGTAC GCAGAGCCAA AGCCGCAGGC ATACAGGTAA GCGCGGAGGT TACCCCCCAC
CACCTGACCC TGACCGAAGC TGAAGTAAGC GGCTACAACA CAAATGCCAA AGTCAACCCG
CCGCTTCGCA CCCAGAGTGA TATTGAGGCA TTAATAAAAG GGCTGAAAGA CGGCACTATA
GATGCCATTG CCACAGACCA TGCCCCCCAC ACTGCCAATG ACAAACTGTG TGAATTCGGT
CTGGCCGCAA ACGGCATTTC GGGGCTGGAA ACCGCATTTG CCAGCCTGAT GGGGCTGGTA
CACTCAGGCT CTATCAGCCT AAGCCTGCTT ATAGAAAAGC TGACCGCCGG CCCCCGGCAG
GTACTGGGTG AAAAACACAA AAACATCGGC AATTTGAAAC CAGGCTCCAG TGCAGATGTG
GTTATATTTG ACCCTGACGA AGAATGGACG GTGGATACCG CCAGATTCTT CTCCAAGGGC
AAAAATACTC CCCTTGAGGG ACGCAGGCTG AAAGGCAGGG TAAAAACCAC CATTGCCTGC
GGCCGGATAG CATACCGGGA ATAA
 
Protein sequence
MKILIKNGRI IDPAGGTDKV ADLLLENGLV AGINSNIPSD KADEVIDAEG KVVCPGFIDL 
HVHLREPGFE GKETIESGCK AAAAGGFTTI CPMPNTNPAA DNLPVIDFVR NTAAKVSPIR
VLPIAAITKG RKGQELSPMG ELAEAGVAGF SDDGDYVSNS SMLLHALLYS RTFGLPVMEH
CEEPCLAEGG VMNEGLLACR LGLKGIPDAA EEIALSRDIA LAKESGGQLH LCHISTAGSV
ELVRRAKAAG IQVSAEVTPH HLTLTEAEVS GYNTNAKVNP PLRTQSDIEA LIKGLKDGTI
DAIATDHAPH TANDKLCEFG LAANGISGLE TAFASLMGLV HSGSISLSLL IEKLTAGPRQ
VLGEKHKNIG NLKPGSSADV VIFDPDEEWT VDTARFFSKG KNTPLEGRRL KGRVKTTIAC
GRIAYRE