Gene DET1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1178 
Symbol 
ID3229551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1075274 
End bp1075753 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID637120741 
ProductMarR family transcriptional regulator 
Protein accessionYP_181892 
Protein GI57234085 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAA AACAGTTTCC GGGAGAATCC GATACTGCAA GGTATGAGCT GTTACAGCGG 
CTGCTGCTCC GTATGTTTTC TTTAATGAAA AATGTTCAGC GGGATGCTTC AGTCATAAAG
CCCTCCCTCA GCCCTCCCCA GGCCAGATTG GTCTTGATAA TAAGCAGGTA CAGTGATTCG
GGAATATCCG TCAAGGAGCT AGCCCGCCTG ACTTCAGTAA CCCCCGGTGC TATTACCCAA
TTTATAAATA CCCTGGTTGA CAAAAAACTG ATAACACGGG AAACAGACCC GGCTGACAGA
CGCAGTATAA AGATAAAGCT GACCCCGTCT GCCAGAAATG AAATCCATCA GTTCAAAAAT
GTACTTTTCA ACTCTGCAGC TAAAAAATTT GATGCCCTGA ATACTGATGA ACTTAAAGAA
ATCACCAGAA TAATGGCCAA GGTCAACCCC GAAATAATTA CCAAAGAAGA AATGTTTTAG
 
Protein sequence
MPEKQFPGES DTARYELLQR LLLRMFSLMK NVQRDASVIK PSLSPPQARL VLIISRYSDS 
GISVKELARL TSVTPGAITQ FINTLVDKKL ITRETDPADR RSIKIKLTPS ARNEIHQFKN
VLFNSAAKKF DALNTDELKE ITRIMAKVNP EIITKEEMF