| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0883 |
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| Symbol | |
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| ID | 3229801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 809291 |
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| End bp | 810598 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637120447 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_181609 |
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| Protein GI | 57234334 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0113166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCC ATATCGTAAA ACGCAGTACG GACAGCTGGT CAATTGTAAT TGAACTGCCA
CGCGATCCAG CTACTGGTAA ACGCAGACAA TCTTGGCATA CGATAAAAGG AACGAAAAAA
GAAGCCGATA AAAAACTGCG TGAACTTCTT ACTGCGCAAG ATAACGGTAT ATTTGTAAAA
CAGAGTAAAT TATCATTTGG CGAATGGCTT GAAAACTGGT GTAGAGATTA CGTTAAGATC
CAAACTACCC AAAGAACATT TGAAAGTTAC TATCAAAACA TAATCGGGCA TATTGAACCT
GCACTAGGCA AGGTTATACT GACTGAACTT ACTCCCCAGA TTATCCAAGC TTATTATGCA
AGGCAATTAG AAAAAGGCCG TGCAGATGGT AAAGGTGGCC TCTCTGCTCG AAGTGTGCTT
TACCAGCATC GGATAATAAG TAAATGCCTT AAACAGGCAA CCAAACTTGG CTTAATTATG
AGAAATCCAG CTGATGCAGT TGAACCACCC AGACCCCGAA AGACTGCAAT ATCTGTTCCA
GATAAAGATG AATTACCCAG ACTCCTAGAT GCTTTTGAAA CAACCCCCTA TTACGTTTTT
TATTGCCTGC TTCTTTATTG TGGCATGCGC CGAGGCGAAG CTTTAGCATT ACGCTGGAAG
GATATAGATT TAAAACAAGA CACAATTCAA ATAGCCGAGA CAGCTTTTAC CTTAAGATCC
GGTGAATACG TCATAAAAGA ACCCAAAACG CCTCACAGTC GAAGATGCAT AGACATACCA
CCCACAATGA AGCTTCTTCT GCTCGAATAC AAAGCAGACC AGACGGCATA TTATGCAAAA
CTAGGGGTAG AACTTGGCTT ACATGACTTC GTCTTTACTC GGCCTAATGG AGAGCCTTTA
AATCCAAATA CAGTTACTCA CACTTTCCTG AAAGCAGTCC GAAAGGCAGG CTTTGATAAG
CTTCGTCTGC ATGACCTGCG TCACTTACAT GCTACGCTTA TGCTTCAGGC AGGTATACAC
CCTAAGATTG TTTCCGAAAG GCTTGGGCAT GCCAGTATCA ATATTACTTT AGATACATAT
AGCCATGTAA TGCCTGGGCT TCAGAAAAAG GCTGTAAATG TTTTTGATAA GATGCTGTCA
GCTAACGAAG AATCGCTTGA AGAAAATTCG GTTAGCAAAC GGTTAGCAAA ACACGAGGGA
GTAAGTGGTA GGCCGTACAG GTCTCGAACC TGTGACCCTC TGATTAAAAG TCAAAAGCTA
AAAAACCAGG CGGAGCCACT CTCCTTTGCA TTATGTTATG TATATTAG
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| Protein sequence | MKGHIVKRST DSWSIVIELP RDPATGKRRQ SWHTIKGTKK EADKKLRELL TAQDNGIFVK
QSKLSFGEWL ENWCRDYVKI QTTQRTFESY YQNIIGHIEP ALGKVILTEL TPQIIQAYYA
RQLEKGRADG KGGLSARSVL YQHRIISKCL KQATKLGLIM RNPADAVEPP RPRKTAISVP
DKDELPRLLD AFETTPYYVF YCLLLYCGMR RGEALALRWK DIDLKQDTIQ IAETAFTLRS
GEYVIKEPKT PHSRRCIDIP PTMKLLLLEY KADQTAYYAK LGVELGLHDF VFTRPNGEPL
NPNTVTHTFL KAVRKAGFDK LRLHDLRHLH ATLMLQAGIH PKIVSERLGH ASINITLDTY
SHVMPGLQKK AVNVFDKMLS ANEESLEENS VSKRLAKHEG VSGRPYRSRT CDPLIKSQKL
KNQAEPLSFA LCYVY
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