Gene DET0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0883 
Symbol 
ID3229801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp809291 
End bp810598 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content42% 
IMG OID637120447 
Productphage integrase family site specific recombinase 
Protein accessionYP_181609 
Protein GI57234334 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCC ATATCGTAAA ACGCAGTACG GACAGCTGGT CAATTGTAAT TGAACTGCCA 
CGCGATCCAG CTACTGGTAA ACGCAGACAA TCTTGGCATA CGATAAAAGG AACGAAAAAA
GAAGCCGATA AAAAACTGCG TGAACTTCTT ACTGCGCAAG ATAACGGTAT ATTTGTAAAA
CAGAGTAAAT TATCATTTGG CGAATGGCTT GAAAACTGGT GTAGAGATTA CGTTAAGATC
CAAACTACCC AAAGAACATT TGAAAGTTAC TATCAAAACA TAATCGGGCA TATTGAACCT
GCACTAGGCA AGGTTATACT GACTGAACTT ACTCCCCAGA TTATCCAAGC TTATTATGCA
AGGCAATTAG AAAAAGGCCG TGCAGATGGT AAAGGTGGCC TCTCTGCTCG AAGTGTGCTT
TACCAGCATC GGATAATAAG TAAATGCCTT AAACAGGCAA CCAAACTTGG CTTAATTATG
AGAAATCCAG CTGATGCAGT TGAACCACCC AGACCCCGAA AGACTGCAAT ATCTGTTCCA
GATAAAGATG AATTACCCAG ACTCCTAGAT GCTTTTGAAA CAACCCCCTA TTACGTTTTT
TATTGCCTGC TTCTTTATTG TGGCATGCGC CGAGGCGAAG CTTTAGCATT ACGCTGGAAG
GATATAGATT TAAAACAAGA CACAATTCAA ATAGCCGAGA CAGCTTTTAC CTTAAGATCC
GGTGAATACG TCATAAAAGA ACCCAAAACG CCTCACAGTC GAAGATGCAT AGACATACCA
CCCACAATGA AGCTTCTTCT GCTCGAATAC AAAGCAGACC AGACGGCATA TTATGCAAAA
CTAGGGGTAG AACTTGGCTT ACATGACTTC GTCTTTACTC GGCCTAATGG AGAGCCTTTA
AATCCAAATA CAGTTACTCA CACTTTCCTG AAAGCAGTCC GAAAGGCAGG CTTTGATAAG
CTTCGTCTGC ATGACCTGCG TCACTTACAT GCTACGCTTA TGCTTCAGGC AGGTATACAC
CCTAAGATTG TTTCCGAAAG GCTTGGGCAT GCCAGTATCA ATATTACTTT AGATACATAT
AGCCATGTAA TGCCTGGGCT TCAGAAAAAG GCTGTAAATG TTTTTGATAA GATGCTGTCA
GCTAACGAAG AATCGCTTGA AGAAAATTCG GTTAGCAAAC GGTTAGCAAA ACACGAGGGA
GTAAGTGGTA GGCCGTACAG GTCTCGAACC TGTGACCCTC TGATTAAAAG TCAAAAGCTA
AAAAACCAGG CGGAGCCACT CTCCTTTGCA TTATGTTATG TATATTAG
 
Protein sequence
MKGHIVKRST DSWSIVIELP RDPATGKRRQ SWHTIKGTKK EADKKLRELL TAQDNGIFVK 
QSKLSFGEWL ENWCRDYVKI QTTQRTFESY YQNIIGHIEP ALGKVILTEL TPQIIQAYYA
RQLEKGRADG KGGLSARSVL YQHRIISKCL KQATKLGLIM RNPADAVEPP RPRKTAISVP
DKDELPRLLD AFETTPYYVF YCLLLYCGMR RGEALALRWK DIDLKQDTIQ IAETAFTLRS
GEYVIKEPKT PHSRRCIDIP PTMKLLLLEY KADQTAYYAK LGVELGLHDF VFTRPNGEPL
NPNTVTHTFL KAVRKAGFDK LRLHDLRHLH ATLMLQAGIH PKIVSERLGH ASINITLDTY
SHVMPGLQKK AVNVFDKMLS ANEESLEENS VSKRLAKHEG VSGRPYRSRT CDPLIKSQKL
KNQAEPLSFA LCYVY