Gene DET0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0873 
Symbol 
ID3229815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp802243 
End bp802911 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID637120437 
ProductDNA-binding protein, putative 
Protein accessionYP_181599 
Protein GI57234348 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATAATG TCTATATAAT TACAATGATG AGTATAGGCG AAAAGATACG AGAATTCCGG 
AAGGCCAGAG GCTGGACGCC TGAATACTTA GGTAGTCGTT CGGGGCTTTC CGGGCAATAT 
ATACGAAAGC TGGAGAAAGG TGAGCGGCAG AGTATTACGC TGACCACCGC CAGTAAACTT 
TCCAGCGCTT TTGGTATTGA ACCATCCAAA CTTATTTCGG AAAGCGAAGC TACATTACCC 
AGGCAAATTG AAGATATACT GACTGAAATC CGGTCTGTGT TTCAAAGACT TGAAACTGTG 
GAAGTTTGCG TACACGGGTG CATGCCTGAA CGCAGACCCC GTAATGAATT AAAATATAAA 
AGCCTTCTTA TTCCCCGCGG CTTGGTTGAA AACCTGAAAA ATATTTATGC CCTCCAGGTA 
GATGATAACC ATTTGGAACA TTTTGGCATA TACCCCGGTG AGATGGTGGT CATTCAGGCA 
GGACAGGCAA TAAAAGACGG CAATCTGTAT GCCTGCCAGA TAGGCCAGGG CATTTACGGG 
TATCATCTGT ATATCACAGA TAATGGCCTC CGTATTTCAG ACGGAAATGG CACAAACCGT 
AATCTGCCGC TGACCGAGAT AAAGGTCCTG GGGAAAATAC TTTTAAGCTA CAAATGTAAA 
GTAATTTAG
 
Protein sequence
MHNVYIITMM SIGEKIREFR KARGWTPEYL GSRSGLSGQY IRKLEKGERQ SITLTTASKL 
SSAFGIEPSK LISESEATLP RQIEDILTEI RSVFQRLETV EVCVHGCMPE RRPRNELKYK 
SLLIPRGLVE NLKNIYALQV DDNHLEHFGI YPGEMVVIQA GQAIKDGNLY ACQIGQGIYG 
YHLYITDNGL RISDGNGTNR NLPLTEIKVL GKILLSYKCK VI