Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0794 |
Symbol | |
ID | 3229863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 731239 |
End bp | 732156 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637120358 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_181526 |
Protein GI | 57234396 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00734303 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTATTC AAGTGCAAGA CTTGGTAAAG GTCTACGGTC CAATCAGGGC GGTGGATGGT ATCAGTTTTG AGGTCAAAAA AGGTGAGGTC TTCGGTATGC TGGGTCCGAA CGGTGCTGGT AAGACTACCA CAACCGAAAT TATTGAGGGG CTGCGGGATG CGGATTCAGG CAGTGTCACG GTGATGGGCA TGGATGTACG CAAACAGCGT GAACAGATTA AACAGCTTAT CGGCATCCAG CTTCAGGCTC CGGCTCTTTT GCCGCTGTTA AATGTAGAAG AAATATTAAA ACTTTTCACC TCTTTCTACC GTAATTCTCT GCCGGTTGAT AAACTATTGG AAATGGTAGC GCTGACCGAA AGCCGCAAGG TGCTTTCTAA GAATCTATCC GGCGGTCAGC AGCAGCGCTT ATCGGTAGCT ATGGCTATGG TCAATAACCC GGAGATTACC TTTCTGGACG AACCCACCAC CGGGCTTGAC CCTCAGGCCA GGCGGGGTTT GTGGTCGGTT ATTGAAGAGC TGCGCGCACA GGGTAAAACA GTCTTCCTCA CCACCCATTA TATGGACGAG GCTGAACGGC TTTGTGACCG GATTGCGGTA GTAGACCATG GCAAGATTAT TGCTTTGGAT ACACCTAAAA AACTTATCTC AAGCAACTTT AAAGAAAGCG CCATTGAGTT TGAAATGGAA CCTGTGCCCT CCGGTGAACT ACTGGGGTCT TTTCCGTGTG TGACCAGTGC TTCAGTAGAA GGTTTTGAGG TTATTTTATA TTCGGCTGAT GTGCCTAAAA CTATGGGCGC CATACTGGAT TATGCGGATA AAAACAAGGG TAATACCGAA CTGCGTAATC TGCATGTCCG CCAGGCCACC CTGGAAGACG TATTCTTGAA ACTGACCGGC AGGAAGATAA GAGAATGA
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Protein sequence | MVIQVQDLVK VYGPIRAVDG ISFEVKKGEV FGMLGPNGAG KTTTTEIIEG LRDADSGSVT VMGMDVRKQR EQIKQLIGIQ LQAPALLPLL NVEEILKLFT SFYRNSLPVD KLLEMVALTE SRKVLSKNLS GGQQQRLSVA MAMVNNPEIT FLDEPTTGLD PQARRGLWSV IEELRAQGKT VFLTTHYMDE AERLCDRIAV VDHGKIIALD TPKKLISSNF KESAIEFEME PVPSGELLGS FPCVTSASVE GFEVILYSAD VPKTMGAILD YADKNKGNTE LRNLHVRQAT LEDVFLKLTG RKIRE
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