| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0622 |
|---|
| Symbol | |
|---|
| ID | 3230019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 574360 |
|---|
| End bp | 575109 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637120187 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_181364 |
|---|
| Protein GI | 57234551 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.165455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTT ATCATCTGGC ATATGAGCCA AGTTACCATT CAATGGATTT TCATTTTTGG
ACTGAATGTA ATTTAAAATG CCGCGGTTGT TATACCAATT ATGAGGTTTA TGATTTTGGC
CTGATGGATG ACCCGGTAGC TGAAATAATT ACCCATGAAA GACAAGCCCC TCCCACCGAA
TTTCTGTCTT TTGACCAGGT TATGGAAAAG ATAGATGGAT ATACTATAAA ATATGCGGTT
TTTCTGGGTA CGGAGGCGGT GCTTGACCCT GAGCTGCCTA AACTTGCCAA GGCTGTCCAT
GAAAAATATG GCTCTTACAA CATACTTTTA ACCAATGGCA TCCGGATGCC AGACCTTACG
GATATTGACC AGGTTATTTT CAGCCTGAAG GCTTATTCCG AAGATATTTA CCGTGATTAT
ACCAGCCGCT CAAACAAGTC AGCCCTGGAA AACCTGAAGA AAATACATGC GGCTTTGGGT
GACCGCAAAC TTCACGTAGA AGTGGTGTAC ATACCTGATT ATATAGCCAA AGACGAAATA
GAAAAGGTAG CCCAGTTTTT AGCCAGCATA GATAAAGATA TGTCCTTCCG TATAGATGCC
TATTTCCCCA TTCCGGGTTG CCCCTGGCGG GCGGCCAACA AGGAAGAGGT GGAAGAAGCC
GCTGAGGCTG CCCGTAAGTA TTTGAATAAT GTGGTGGTGC TTACCCTGGA TATGAAACGA
ATCGGTGATA AGGCCATTAA GGTTTTTTAA
|
|---|
| Protein sequence | MKVYHLAYEP SYHSMDFHFW TECNLKCRGC YTNYEVYDFG LMDDPVAEII THERQAPPTE
FLSFDQVMEK IDGYTIKYAV FLGTEAVLDP ELPKLAKAVH EKYGSYNILL TNGIRMPDLT
DIDQVIFSLK AYSEDIYRDY TSRSNKSALE NLKKIHAALG DRKLHVEVVY IPDYIAKDEI
EKVAQFLASI DKDMSFRIDA YFPIPGCPWR AANKEEVEEA AEAARKYLNN VVVLTLDMKR
IGDKAIKVF
|
|---|
| |