Gene DET0491 details

Gene Information

• Locus tag: DET0491
• Symbol: rpsE
• ID: 3230239
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 453413
• End bp: 453931
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637120057
• Product: 30S ribosomal protein S5
• Protein accession: YP_181235
• Protein GI: 57234770
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0937948
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTAGCTA AGGTAGAAAG AATCGATCCT TCTGAGCTTG AACTGAATGA CAAGCTTATA 
TTTATTAACC GCGTGACCAA GGTGGTTAAA GGCGGTAAGC GCATGGGTTT TGCGGCTCTG 
GTGGTAACCG GAGACGGTAA AAATCATGTA GGTATCGGCG TAGGCAAGGC CAAGGAAGTT 
CCTTCGGCTA TATCCAAAGC CAGTGCCAAT GCCAAGCGCA ATCTTTCCCG TATACTTCTA 
AACGGGACTA CCGTCCCCCA CGAAATAGTT TTTAAATACG GCGCCGCTCA GGTTTTGCTG 
AAGCCGGCTG CTCCCGGTAC CGGTATCATT GCCGGCGGCA GTGTCAGGGC AGTATTGGAA 
TCCACCGGCA TTAAGGATAT TCTGACCAAG TCTATGGGTT GCAGTAACAA GGCCAATGTT 
GCCAAGGCTA CTCTGGGCGG GCTGACTGCC ATGCGGGATC CCAAAACTAC GGTTACCAAA 
CGGCGCTCTT CTTTGAAAGA GGAGGCTGCT GGTGGCTAA 

 

Protein sequence

MLAKVERIDP SELELNDKLI FINRVTKVVK GGKRMGFAAL VVTGDGKNHV GIGVGKAKEV 
PSAISKASAN AKRNLSRILL NGTTVPHEIV FKYGAAQVLL KPAAPGTGII AGGSVRAVLE 
STGIKDILTK SMGCSNKANV AKATLGGLTA MRDPKTTVTK RRSSLKEEAA GG