Gene DET0489 details

Gene Information

• Locus tag: DET0489
• Symbol: rplF
• ID: 3230241
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 452483
• End bp: 453031
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637120055
• Product: 50S ribosomal protein L6
• Protein accession: YP_181233
• Protein GI: 57234772
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000497907
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTAGAA TAGGTAAAAT GCCGATAAAG GTTCCACCCG GCGTAACGGT GGACATAAAA 
GGGAATGATG TAACTGTTAA AGGGCCTAAA GGCACTCTTA ACAGGACCTT CAGACCGGAA 
GTAACCATTA CCCGTGACGG GGATTATCTG GTTGTCGCTC CGGTAGGTAC AGACAAGGCC 
GCCAGGTCTT TCTTCGGCCT TAGCCGTACC CTTTTGGATA ATATGATTGT GGGTGTCAAA 
GACGGCTTTG ACAAGAACCT TGAAATAGTG GGCGTGGGTA TGCGTGCTGA CAAAGATGGC 
AACAATATCA TCTTTAAAGT AGGTTATTCG CACACTGTTA CGGTAGCCCC TCCGGCGGGC 
ATCACTTTGA GTGTAGACGG TACCACCAAA GTCAAGGTAT CCGGTATAAA TAAAGAAGAA 
GTGAGCCAGA TGGCTGCTGA AATCAGGTCT ATCAGAAAGC CTGACCATTA TATGGGCAAG 
GGTATCAGAT ATGCCGGTGA ATATGTACGC ATCAAGCCCG GCAAGGCTAT CGGAAAGGGT 
GCTAAGTAA 

 

Protein sequence

MSRIGKMPIK VPPGVTVDIK GNDVTVKGPK GTLNRTFRPE VTITRDGDYL VVAPVGTDKA 
ARSFFGLSRT LLDNMIVGVK DGFDKNLEIV GVGMRADKDG NNIIFKVGYS HTVTVAPPAG 
ITLSVDGTTK VKVSGINKEE VSQMAAEIRS IRKPDHYMGK GIRYAGEYVR IKPGKAIGKG 
AK