Gene DET0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0250 
Symbol 
ID3230438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp239758 
End bp240828 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content55% 
IMG OID637119817 
Productiron ABC transporter, periplasmic iron-binding protein, putative 
Protein accessionYP_180998 
Protein GI57234969 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0491648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAG CTGCCAAATA CGCCACCCGC CAGATAACTG ACCAGGCCGG ACGCCAGGTT 
CATTTCGGCT GCTTGCCCCA GCGGATTATA TCCCTTGCCC CCAGCCTGAC CGAAATAGTG
TATGCCCTGG GAGCGGAAGA CCTTTTAAAG GGCGTGACTG ACTACTGTGA TTACCCTCCC
GAAGCCAAAA ACAAGCCCAG GGCTGGCGGT TACAGTACAG TTGACGTCGA CCAGATTGGC
AAAATACAGC CGGATTTGAT ACTGGCCGGG CAGATACACT TAAAAGATAT TGTCCCCCGG
CTGGAGGCGC TGGGTTATCC GGTGCTGGTG CTTGAACCAA GCACGGTAGA AGGTTTGCTG
GAAACTATCC GGATAGTGGG CAAGTGTACC GGGCGGGCTA AGGCCGCTGA ACTGCTGGCG
GAGTCACTGG GCAGGCGGAC AGACTTTATA ACCGCCAAAA TCGCTTCCCT GTCACCGGAA
AACCGCCCCC TGGTTTATGT TTTGCATGAA TGCCAGACCT GGAAAACCTT TGGTTCGGAT
ACCATAGGGG ATACCCTGAT TGAGATGGCC GGGGGGTATA ATATCGGGCG GGATTTCGGC
CGTTATTATC CGTATCCTGC CAAAGAGGAT ATTAAACTCA AAAACCCGGA TATTATTATT
GCCGAAACCG GTTACGGGGA TAACCCCCGG GAACCGCTTA ATATCGCCCT TGGCGAGCCT
GTTCTGGCAG AGGTAACCGC CCGCCGGACC GGGCGGGTCT TTGGTATCCA CAGTGACCTG
GTCAGCCGGG CAGGCCCCCG GATGGTGGAC GGGCTGGAGT GTCTGGCTCA CCTTATTCAC
CCGGAGTTAT TTCCGGCCAA ACCTGCCGTT TGCTGCGGCC GGGTCTATAT AGCCGGGGTA
GGGCCGGGTT TGGCTAAGTG GGTTTCACCC AGAGTGAAAG AGCTGGTGGC CGAGGCGGAT
ATACTGGTGG GTTGGAAACA GGACTTGCAA CCTGTAAAGG GTCTGATTAA AAGTCAAAAG
CTAAAAAACC AGGCGGAGCC ACTCTCCTTT GCATTATGTT ATGTATATTA G
 
Protein sequence
MSTAAKYATR QITDQAGRQV HFGCLPQRII SLAPSLTEIV YALGAEDLLK GVTDYCDYPP 
EAKNKPRAGG YSTVDVDQIG KIQPDLILAG QIHLKDIVPR LEALGYPVLV LEPSTVEGLL
ETIRIVGKCT GRAKAAELLA ESLGRRTDFI TAKIASLSPE NRPLVYVLHE CQTWKTFGSD
TIGDTLIEMA GGYNIGRDFG RYYPYPAKED IKLKNPDIII AETGYGDNPR EPLNIALGEP
VLAEVTARRT GRVFGIHSDL VSRAGPRMVD GLECLAHLIH PELFPAKPAV CCGRVYIAGV
GPGLAKWVSP RVKELVAEAD ILVGWKQDLQ PVKGLIKSQK LKNQAEPLSF ALCYVY