Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0243 |
Symbol | |
ID | 3230415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 233493 |
End bp | 234233 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119810 |
Product | radical SAM domain-containing protein |
Protein accession | YP_180991 |
Protein GI | 57234946 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0453811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT ACCAGATTAC CTATGAGCCG AATTACCGGG TGCTGGGGCT TCACTTCTGG GGCTGCAACC TTTTTTGCCG CGGCTGTTAT AAAAACTACC GGATTGACGA CCTTAGTCTG CCGGGCAGTT CGGTAGAACA GCTTAAAGAT GCTCCCAGAG CCAAAAATCC TGCCAGATTT TTAACCCTTG AGGAAGTGCT GGAAAAGACT GAAGGCCTGA CCCCCAGAGA TATATTCTTT ATGGGCAAGG AAGCCTCGCT TGACCTCGAA CTGCCTCTGC TGGCAGCCCG GCTTCATGCC CGGCACAAGA GCTTCCACAC CCTGCTGACC AACGGGCGTA AACTTACCGA CCTTTCAGAT ATAGACGAAG CGGTTTTCGG CTTTAAATCT GCCAGCGAAT CTGTCCACCG GGAATATACC GGGCTGTCCA ATACGGGCAT ACTGGCTAAT TTCAAGAAGG TTTACCAGAG CGGTAAAAAG GTTCAGGCTG AAATAGCTTT CATTCCCGAC CTGGTGGAAG AGGAAGAGAT TGGGGCGCTG GCTAAGACTA TCTCTGAAAT AGACCGCCGG CTTCTTTTCC GGGTTACGGC CTATTTTGCT GTACCGGGAG CTCCGTGGCC TTCGGCCTGC CGGGAGCAGG TGGAAGATGC CGCTTCAGTT GCCCGCAGAT ACCTTGATAA CGTGGTTACT ATGGCCTCTG ACAGCCGGGA TAACGGCTGG AAGCCGGAAG TAATTTTTTA G
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Protein sequence | MNIYQITYEP NYRVLGLHFW GCNLFCRGCY KNYRIDDLSL PGSSVEQLKD APRAKNPARF LTLEEVLEKT EGLTPRDIFF MGKEASLDLE LPLLAARLHA RHKSFHTLLT NGRKLTDLSD IDEAVFGFKS ASESVHREYT GLSNTGILAN FKKVYQSGKK VQAEIAFIPD LVEEEEIGAL AKTISEIDRR LLFRVTAYFA VPGAPWPSAC REQVEDAASV ARRYLDNVVT MASDSRDNGW KPEVIF
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