Gene DET0239 details

Gene Information

• Locus tag: DET0239
• ID: 3230428
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 230439
• End bp: 231110
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637119806
• Product: radical SAM domain-containing protein
• Protein accession: YP_180987
• Protein GI: 57234959
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1180] Pyruvate-formate lyase-activating enzyme

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTGTC ACGGGTGTCT GTGCAAAGAG GGTATTTATG ACCATCTGCT GAAAGAAAAC 
AGACTTGGTA ACCTGCCTCA AACTGAAAAT GCCTTTAAAC CCAGGCGTCT GCTGGAACTG 
GATGAAGTAC TGGCCAGACT TGATGAACTG AAACCCCAAA AGGTGTTCCT GACCGGAGAA 
GAAGCCTCTC TTGACCCGAA TTACGCCGCC ATTACCCGGG CTTTTCATGA GCGGTATGGC 
TGTAAAAATG TTTTATATAC CAACGGGTTT AAAATGCCTG CCCTGGGAGA CACCGATGCG 
GTTGAGGTGG GTATAAAGGC TATTTCCGAG GAACTGCACC AGTGGTACAC CGAACGTTCG 
GTTGAGCCGA TAAAGCAAAA CTTTATCCGT TATGCCCATT CGGAGGTAAA GCTGACTGCC 
GCTTCCATAC TTATACCCGG GCTGGTGGAA ATAGATGAAA TTGAGCGGAT AGCCCAATTT 
ATAGCCGGTG TCAACCCGGA TATACCGTAT TTTGTGCTGC CGTATTTCCC GGCCGGCAAT 
AATAGCTGGC GTAAAACCAG CCCTTATGAG GTGGCCGAAG CGGTGGAAAG AGTAAGCCGC 
TATCTGACGA ATGTATCCGG CTGTCAGGGA GTTGAGCAGG AAATACTCCA CGAAGTGGAA 
CGGGTAGTCT AA 

 

Protein sequence

MSCHGCLCKE GIYDHLLKEN RLGNLPQTEN AFKPRRLLEL DEVLARLDEL KPQKVFLTGE 
EASLDPNYAA ITRAFHERYG CKNVLYTNGF KMPALGDTDA VEVGIKAISE ELHQWYTERS 
VEPIKQNFIR YAHSEVKLTA ASILIPGLVE IDEIERIAQF IAGVNPDIPY FVLPYFPAGN 
NSWRKTSPYE VAEAVERVSR YLTNVSGCQG VEQEILHEVE RVV