Gene DET0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0052 
Symboltgt 
ID3229043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp45042 
End bp46220 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID637119622 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_180807 
Protein GI57233581 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAAAT CCTTTATATT AAATAAAACC AGTCCCCGCA GTTCTGCCCG CCGCGGCCAG 
CTGCTCACAG CCCATGGCCA GGTGGAGACG CCTGTGTTCT GCCCGGTAGG CAGCCAGGCC
ACTGTAAAAA CCCTTACCCC CGAAGACCTG AAATCTGTAA ACGTAAATAT GATACTCTCT
AATACCTATC ACCTGTATCT CCGCCCCGGC ATACCCGTGG TTAAAGAGAT GGGGGGACTG
CATAAATTTA TGAACTGGGA CGGGGTTATC CTGACTGACA GCGGTGGCTA TCAGATATTT
TCACTGGCCA ATCTGCGAAA GCTGGATGAG GGCGGGGTCA GTTTCCGTTC CCATATAGAC
GGCAGCACCC GTTACATTAC CCCCGAAGAT GCGGTCAGCT TCCAGCAGGA TTTGGGTTCG
GATATTGCCA TGGTGCTGGA CGAATGTCCC CATTCCGAAG CCTCCGAGAA TGAGGTTTTG
GCGGCTATGG AACGCACCCA CCAGTGGGCA AAACGCTGTC TTGCCGCCCA TACCCTGAAA
AGCCAGCACC TTTTTGCCAT TGTTCAGGGG GGGCTTTCCC CCGTACTCAG GCAACAGTCT
GCCGAATATC TGGCTTCGCT GGATTTCCCC GGTTATGCCC TGGGCGGGCT TTCGTTAGGT
GAGCCTAAGG ATATTACCTT TGAAACAGTC CGCCATACCC TGCGGTTTCT GCCCGAAAAC
AAGCCCCGCT ACCTGATGGG GGTGGGTGCG CCGGAAGATT TGCTGGAAGG GGTAAGCTGC
GGGGTAGATA TATTTGACTG TGTACTGCCT ACCAGAGTGG CCCGCAACGG GGCTTTTTTC
AGCCGCCTGG GCAGGCTTAA TATTCGCAAT GCCTCTTTTG CCACCCAAAA AGGGCCGGTT
GACCCGGAGT GTAACTGCTA TACCTGCCGC AATTATTCGG CGGCCTACCT GCATCACCTG
TTCCGCTGTG AAGAAATACT GGCCTACCGG CTGGCTACTA TACATAACAT TGCCTTCCTG
AGCAACCTTA TGCAGGAAGT TCGTACTTCT ATTGAAAAAG ACTGTTTTGA AGAGTTTAAA
GGGGATTTCC TGACCCGCTA TCAGCCTACC AACGAATCTG TCCGTATTGA GCAGAAACAG
AAATGGCTCT CCGCCCGCAG CGGCGAAACC TCTTCCTAG
 
Protein sequence
MDKSFILNKT SPRSSARRGQ LLTAHGQVET PVFCPVGSQA TVKTLTPEDL KSVNVNMILS 
NTYHLYLRPG IPVVKEMGGL HKFMNWDGVI LTDSGGYQIF SLANLRKLDE GGVSFRSHID
GSTRYITPED AVSFQQDLGS DIAMVLDECP HSEASENEVL AAMERTHQWA KRCLAAHTLK
SQHLFAIVQG GLSPVLRQQS AEYLASLDFP GYALGGLSLG EPKDITFETV RHTLRFLPEN
KPRYLMGVGA PEDLLEGVSC GVDIFDCVLP TRVARNGAFF SRLGRLNIRN ASFATQKGPV
DPECNCYTCR NYSAAYLHHL FRCEEILAYR LATIHNIAFL SNLMQEVRTS IEKDCFEEFK
GDFLTRYQPT NESVRIEQKQ KWLSARSGET SS