| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0052 |
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| Symbol | tgt |
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| ID | 3229043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 45042 |
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| End bp | 46220 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637119622 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_180807 |
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| Protein GI | 57233581 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGATAAAT CCTTTATATT AAATAAAACC AGTCCCCGCA GTTCTGCCCG CCGCGGCCAG
CTGCTCACAG CCCATGGCCA GGTGGAGACG CCTGTGTTCT GCCCGGTAGG CAGCCAGGCC
ACTGTAAAAA CCCTTACCCC CGAAGACCTG AAATCTGTAA ACGTAAATAT GATACTCTCT
AATACCTATC ACCTGTATCT CCGCCCCGGC ATACCCGTGG TTAAAGAGAT GGGGGGACTG
CATAAATTTA TGAACTGGGA CGGGGTTATC CTGACTGACA GCGGTGGCTA TCAGATATTT
TCACTGGCCA ATCTGCGAAA GCTGGATGAG GGCGGGGTCA GTTTCCGTTC CCATATAGAC
GGCAGCACCC GTTACATTAC CCCCGAAGAT GCGGTCAGCT TCCAGCAGGA TTTGGGTTCG
GATATTGCCA TGGTGCTGGA CGAATGTCCC CATTCCGAAG CCTCCGAGAA TGAGGTTTTG
GCGGCTATGG AACGCACCCA CCAGTGGGCA AAACGCTGTC TTGCCGCCCA TACCCTGAAA
AGCCAGCACC TTTTTGCCAT TGTTCAGGGG GGGCTTTCCC CCGTACTCAG GCAACAGTCT
GCCGAATATC TGGCTTCGCT GGATTTCCCC GGTTATGCCC TGGGCGGGCT TTCGTTAGGT
GAGCCTAAGG ATATTACCTT TGAAACAGTC CGCCATACCC TGCGGTTTCT GCCCGAAAAC
AAGCCCCGCT ACCTGATGGG GGTGGGTGCG CCGGAAGATT TGCTGGAAGG GGTAAGCTGC
GGGGTAGATA TATTTGACTG TGTACTGCCT ACCAGAGTGG CCCGCAACGG GGCTTTTTTC
AGCCGCCTGG GCAGGCTTAA TATTCGCAAT GCCTCTTTTG CCACCCAAAA AGGGCCGGTT
GACCCGGAGT GTAACTGCTA TACCTGCCGC AATTATTCGG CGGCCTACCT GCATCACCTG
TTCCGCTGTG AAGAAATACT GGCCTACCGG CTGGCTACTA TACATAACAT TGCCTTCCTG
AGCAACCTTA TGCAGGAAGT TCGTACTTCT ATTGAAAAAG ACTGTTTTGA AGAGTTTAAA
GGGGATTTCC TGACCCGCTA TCAGCCTACC AACGAATCTG TCCGTATTGA GCAGAAACAG
AAATGGCTCT CCGCCCGCAG CGGCGAAACC TCTTCCTAG
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| Protein sequence | MDKSFILNKT SPRSSARRGQ LLTAHGQVET PVFCPVGSQA TVKTLTPEDL KSVNVNMILS
NTYHLYLRPG IPVVKEMGGL HKFMNWDGVI LTDSGGYQIF SLANLRKLDE GGVSFRSHID
GSTRYITPED AVSFQQDLGS DIAMVLDECP HSEASENEVL AAMERTHQWA KRCLAAHTLK
SQHLFAIVQG GLSPVLRQQS AEYLASLDFP GYALGGLSLG EPKDITFETV RHTLRFLPEN
KPRYLMGVGA PEDLLEGVSC GVDIFDCVLP TRVARNGAFF SRLGRLNIRN ASFATQKGPV
DPECNCYTCR NYSAAYLHHL FRCEEILAYR LATIHNIAFL SNLMQEVRTS IEKDCFEEFK
GDFLTRYQPT NESVRIEQKQ KWLSARSGET SS
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