Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0007 |
Symbol | |
ID | 3229136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | + |
Start bp | 9581 |
End bp | 10744 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637119577 |
Product | hypothetical protein |
Protein accession | YP_180762 |
Protein GI | 57233673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.870936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAGA ATATACTAAT TATTGGCGGT TACGGCAATG CCGGCAGCTG TATAGCTATG CTCCTCCTTC AGGAGACAGA TGCCCGCATA TTTCTGGGCG GCAGGAATCT GGAGAAAGCC AGGTATGTAG CCGAAGGGCT GAACCAGCTG GAAAACATCC AGCGGGTAGA GGGGGTAAAA CTAAATGTGG AAGACCCCCA GAGCCTGAAA GAGGCTTTCT GCGGTATGGA CATAGTGGTG GTGGCTTCCA ATACGCCCGA ATATGCCCGC CAGATTGCCT TTGCCGCTTT GGAAGCTAAA GTGGATTATA TTGATATCCA GTATTCAGAC CGCAAGCTTC ACCAGCTGAA GCTGCTTTCC CAGAAGATAA ATAATGCTAA TTTGTGCTTT ATTACCGAGG CCGGCTCGCT GCCGGGACTG CCTTCGGCCC TGGTGCATTT TTGCCATCAA GGGTTTACCA CTCTGGAAAG GGTTTCGGTG GGGGCTATTA TCTGCCAGAA CTGGAAATCA GCCATATCCG AAGAGCGCAC CAACGAAGTA ATGCGCCAGC TTTCGGATTA CCAGCCCTAT ATTTACCGGG ATTATCACTG GAAGCGTTTG GGCTGGTTTC GCCCCGGCAC TTCACGCACC TTTAATTTCG GGCCTTTCGG CCGTTTTTCC TGCGGCCCTA TGACCCTTGA AGAAATGCGC CCGCTGCCCG GCATGTACCC CACCCTCAAA GAGCTGGGTT TTTATCTGGG CGGGTTTAAC TGGTTTACCA ACTGGATAAG CATACCCCTT TTGAACCTTG GGCTTCGCTT TTTGGGCAAA GAGGCTAAAC GCTCTTTGGG CAGACTGCTG GTCTGGGGGC TGCGCAATTT TGACAGCCAG CCTTATGGTA TGGCCATCAA GGTTTCCGCC AGAGGCGAAA GGGGCGGGAT AAGGGAGCGG CAGGAAATGC TGCTTTCCCA TAAAGATTCA TATATGTTTA CGGCTATACC CCTGGTAGCC TGCTTGAAAC AGTATATAGA CGGTTCAGCC CGGCGTTCCG GCCTGCATTA TATGGGGCAT CTGGTAGATT CCAGGCGGCT GGTGGCGGAT ATGGAAAAAA TGGGTATGAC TATCCGTTTT CAAACCCATC TGATAGACAA GCCCCCGGCA GAACGCCCCC GGATAGAAAA CTAA
|
Protein sequence | MTKNILIIGG YGNAGSCIAM LLLQETDARI FLGGRNLEKA RYVAEGLNQL ENIQRVEGVK LNVEDPQSLK EAFCGMDIVV VASNTPEYAR QIAFAALEAK VDYIDIQYSD RKLHQLKLLS QKINNANLCF ITEAGSLPGL PSALVHFCHQ GFTTLERVSV GAIICQNWKS AISEERTNEV MRQLSDYQPY IYRDYHWKRL GWFRPGTSRT FNFGPFGRFS CGPMTLEEMR PLPGMYPTLK ELGFYLGGFN WFTNWISIPL LNLGLRFLGK EAKRSLGRLL VWGLRNFDSQ PYGMAIKVSA RGERGGIRER QEMLLSHKDS YMFTAIPLVA CLKQYIDGSA RRSGLHYMGH LVDSRRLVAD MEKMGMTIRF QTHLIDKPPA ERPRIEN
|
| |