Gene TC0890 details

Gene Information

• Locus tag: TC0890
• ID: 1246258
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 1033623
• End bp: 1034231
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637061703
• Product: hypothetical protein
• Protein accession: NP_297263
• Protein GI: 15835504
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1388] FOG: LysM repeat

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.874622
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGCTA ATCGGTTATT TCTAATCACC CTTATAGGTT TTGGCTATTC TGCTTACGGT 
GCCAGCACAG GGAAATCACC TTCTTTACAG GTTATTTTAG CTGAAGTCGA GGATACATCT 
TCGCGCTTAC AAGCTCATCA GAATGAGCTT GTTATGCTCT CGGAACGTTT AGATGAGCAA 
GACACAAAAC TTCAACAACT CTCGTCAACT CAGGCCCGTA ATCTTCCTCA ACAAGTTCAA 
CGGCTTGAGA TTGATCTGAG AGCTCTGGCT AAAACAGCTG CTGTGCTCTC GCAATCTGTT 
CAGGATATCC GATCATCCGT GCAAAATAAA TTACAAGAAA TCCAACAAGA ACAAAAAAAT 
TTAGCTCAAA ATTTACGAGC GCTTCGCAAC TCCTTACAAG CACTAGTTGA TGGCTCTTCC 
CCAGAAAATT ATATTGATTT TTTGGCCGGG GAGACACCTG AACATATTCA CGTTGTTAAA 
CAAGGAGAAA CCCTGAGTAA AATCGCTAGT AAGTACAATA TCCCTGTCGC AGAATTGAAA 
AAACTTAATA AATTAAATTC CGATACTATT TTTACTGATC AAAGAATCCG ACTTCCAAAA 
AAGAAATAA 

 

Protein sequence

MLANRLFLIT LIGFGYSAYG ASTGKSPSLQ VILAEVEDTS SRLQAHQNEL VMLSERLDEQ 
DTKLQQLSST QARNLPQQVQ RLEIDLRALA KTAAVLSQSV QDIRSSVQNK LQEIQQEQKN 
LAQNLRALRN SLQALVDGSS PENYIDFLAG ETPEHIHVVK QGETLSKIAS KYNIPVAELK 
KLNKLNSDTI FTDQRIRLPK KK