| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0861 |
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| Symbol | gspD |
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| ID | 1246229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 995109 |
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| End bp | 997388 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637061674 |
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| Product | general secretion pathway protein D |
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| Protein accession | NP_297234 |
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| Protein GI | 15835475 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.473391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAATG TTTTGCGCTA TGGTTTCATA GGAGCGTTCT GTTTTGGGAG TTTAGATATT
CCGGTGTTTT CCATCACCGT TGCGGAAAAA TTAGCTTCCA TAGAAGGAAA AACAGAAGCT
CAGGCTCCTC TTGCTCACAT TTCTTCCTTT AACTCCGAGT TAAAGGAAGC GAATGCTCTA
CTCAAGTCTT TATATGATGA AGCTTTATCT TTACGATCTC TAGGAGAAAC TTCTCAAGAA
GTTTGGAACG ATTTACGGGA TCGTTTGATC AGCGCGAAAC AACGGGTGCG GGCGTTAGAA
GATCTATGGT CGGCAGAGGT CTCAGAGAAA GGGGGTGATC CTGAAGATTA TGCTCTTTGG
AATCATCCTG AGACTACTAT TTACAACCTT GTTAGCGATT ATGGTGATGA ACAAAGTATT
TACTTGATCC CTCAAAATGT GGGGGCAATG CGAATAACAG CCATGTCAAA GTTGGTTGTG
CCTAAAGAGG GATTTGAAGA GTGTTTATCG TTGCTTTTGG CTCGTTTAGG TATTGGGGTG
AGACAGGTGA GCCCCTGGAT CAAAGAGCTC TATTTAACGA GTAAGGAAGA GACTGGAGTA
GTAGGTATCT TTGGAGCTAG ACAAGACCTC GATGTTCTGC CTTCAACCGC TCATATTGCT
TTTGTTCTTT CTTCTAAAAA TTTAGACGCA CGATCTGATG TACAAGCTTT GCGGAAGTTT
GCAAACAGCG ATACCATGTT GATTGATTTT ATCGGCGGGA AAATTTGGCT GTTTGGAGTG
GTTCATGAAA TCACTGAGCT TCTCAAAATT TATGAATTTT TACAGTCAGA TAATATTCGA
CAAGAGCATC GGATAGTATC TTTGTCTAAG ATAGACCCTT TCGAAATGTT AGCTATTTTG
AAAGCAGCTT TTCGAGAAGA TTTAGCTAAA GAAGGGGAAG ATTCTGCGGG CGTAGGATTA
AAAGTTGTTC CCTTGCAGAA TCATGGACGC TCTCTTTTCT TAAGTGGAGC TCTTCCTATA
GTTCAAAAGG CGATCGATCT CATTCGCGAG TTGGAAGAAG GAATAGAGAA TCCTACAGAT
AAAACAGTGT TTTGGTATAA CGTCAAACAC TCAGATCCTC AAGAGCTTGC AGCTTTGCTC
TCTCAAGTTC ATGATATTTT TTCAAGCGGT TCGGGGATAG CGGGAAGTCA GGATACTAGC
GTATCTGCTA ATAAGTCTGG GGCAGCCTCG AATGGATTAG CTGTGCAGAT AGATACGTCT
ATCGGGGGAA CCTCGAAGGA AGGCTCCACC AAATATGGGA GCTTTATTGC CGACTCTAAG
ACCGGAACTT TGATTATGGT CATTGAGAAA GAGGCTCTTC CAAAAATTAA GATGTTATTG
AAAAAACTCG ATGTGCCGAA AAAAATGGTT CGTATAGAGG TCTTGCTTTT CGAAAGAAAA
CTATCGAGCC AGCGTAAATC GGGGTTAAAT CTATTACGTT TAGGAGAAGA GGTTTGTAAA
CAGGGGACTC AAGCAGTTTC TTGGGCAAAT GGTGGAATTT TAGAATTCTT GTTTAAGGGA
GGAGCAAAGG GGATTGTCCC TAGTTATGAC TTTGCTTATC AATTCCTTAT GGCTCAAGAA
GATGTGCGCA TTAATGCGAG CCCTTCTGTA GTAACGATGA ACCAAACCCC AGCTAGAATT
GCGATTGTGG AAGAAATGTC GATAGCAGTT TCTTCAGAGA AAGACAAAGC GCAATATAAT
CGAGCTCAGT ACGGGATTAT GATTAAGATC CTGCCGGTAA TTAATATTGG GGAGGAAGAT
GGGAAGAGTT TCATCACTCT AGAAACAGAT ATTACGTTTG ATTCAACAGG GAAAAATCAA
GCAGATCGTC CTGATGTTAC TCGAAGAAAT ATTACAAATA AGGTGCGAAT TCAGGATGGG
GAAACTGTAA TCATTGGGGG ATTGCGGTGT AATCAAACTA TGGATTCTCG AGATGGGATT
CCTTTCTTAG GAGAATTGCC AGGAATAGGC AAATTATTTG GCATGGATGC CACTTCGGAT
TCACAGACAG AGATGTTTAT GTTTATTACT CCAAAGATTT TGGATAATCC TGTTGAGGAA
GAAGAAAAGT TGGAATGTGC CTTTCTAGCT TCTCGTCCTG GTGAGAATGA GGATTTTCTA
AGAGCTGTAG TGTCAGGTCA GCAGGCTGCT AAACAGGCTA TGGAGAAAAA AGAGTCTATC
GCATGGAGAG AAGAAACTCA TAGTTTGCGG GAAGGAGTGG AGTACGATGG CCGAGAATAA
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| Protein sequence | MKNVLRYGFI GAFCFGSLDI PVFSITVAEK LASIEGKTEA QAPLAHISSF NSELKEANAL
LKSLYDEALS LRSLGETSQE VWNDLRDRLI SAKQRVRALE DLWSAEVSEK GGDPEDYALW
NHPETTIYNL VSDYGDEQSI YLIPQNVGAM RITAMSKLVV PKEGFEECLS LLLARLGIGV
RQVSPWIKEL YLTSKEETGV VGIFGARQDL DVLPSTAHIA FVLSSKNLDA RSDVQALRKF
ANSDTMLIDF IGGKIWLFGV VHEITELLKI YEFLQSDNIR QEHRIVSLSK IDPFEMLAIL
KAAFREDLAK EGEDSAGVGL KVVPLQNHGR SLFLSGALPI VQKAIDLIRE LEEGIENPTD
KTVFWYNVKH SDPQELAALL SQVHDIFSSG SGIAGSQDTS VSANKSGAAS NGLAVQIDTS
IGGTSKEGST KYGSFIADSK TGTLIMVIEK EALPKIKMLL KKLDVPKKMV RIEVLLFERK
LSSQRKSGLN LLRLGEEVCK QGTQAVSWAN GGILEFLFKG GAKGIVPSYD FAYQFLMAQE
DVRINASPSV VTMNQTPARI AIVEEMSIAV SSEKDKAQYN RAQYGIMIKI LPVINIGEED
GKSFITLETD ITFDSTGKNQ ADRPDVTRRN ITNKVRIQDG ETVIIGGLRC NQTMDSRDGI
PFLGELPGIG KLFGMDATSD SQTEMFMFIT PKILDNPVEE EEKLECAFLA SRPGENEDFL
RAVVSGQQAA KQAMEKKESI AWREETHSLR EGVEYDGRE
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