| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0852 |
|---|
| Symbol | sctS |
|---|
| ID | 1246220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 988303 |
|---|
| End bp | 988587 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637061665 |
|---|
| Product | type III secretion inner membrane protein SctS |
|---|
| Protein accession | NP_297225 |
|---|
| Protein GI | 15835466 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4794] Type III secretory pathway, component EscS |
|---|
| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGC TTGCAACAAG TTTCAAATCC ATGCTGTTTG AATATTCATA TGAAGCCCTC
TTGTTAATTC TAATCATTTC TGCTCCTCCA ATCATTTTGG CCTCTATTGT TGGGATTATG
GTGGCCATTT TTCAAGCGGC AACACAGATT CAAGAGCAAA CATTTGCCTT TGCCATTAAG
TTAGTCGTTA TTTTCGGAAC GCTTATGATT ACAGGCGGAT GGTTGTGTAG TATGATTTTA
CGATTTGCGG CTCAAATTTT TACAAATTTT TACAAGTGGA AGTAG
|
|---|
| Protein sequence | MLMLATSFKS MLFEYSYEAL LLILIISAPP IILASIVGIM VAIFQAATQI QEQTFAFAIK
LVVIFGTLMI TGGWLCSMIL RFAAQIFTNF YKWK
|
|---|
| |