| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0851 |
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| Symbol | sctR |
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| ID | 1246219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | + |
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| Start bp | 987356 |
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| End bp | 988291 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637061664 |
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| Product | type III secretion system protein |
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| Protein accession | NP_297224 |
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| Protein GI | 15835465 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGATTGA TTTGTCGAAT TTTCTTCTTT CTATGCGTAC TTAGTGCTCC CCAGGGCTTT
TCCAACGTCT GTTCTGATGC TTCCTGTTCT AAAGTACAGG GATCCTCTTC TTGCCGACCA
TGTGGGGCTA CTCCTCAACA GGAGATTCAG GATTCTCCAG GAACCCCACC CCCCCCCTTT
CGCTGTCCAT CTTACAGACA ACCAGTAGAA GCTCAGGATC TCCTTGCTTC TCAAGAAGAT
CTTTCTTCCG GAGCCTTTTC AGACACGTAT CCAGATTTAA CCACACAAGC GGTTATTATA
TTATTCCTTG CGCTTTCTCC CTTTCTGGTT ATGCTTCTGA CCTCCTATCT GAAGATTATT
ATCACGTTAG TCCTACTCAG AAATGCCTTG GGAGTACAAC AAACTCCTCC TAGCCAAGTC
CTCAACGGGA TTGCCTTGAT TCTGTCTATC TATGTCATGT TCCCTACTGG AATGGCTATG
TATAACGACG CTAAAAAAGG CATTGAATCT GATGCCGTTC CTCGAGACCT TTTTTCTGCA
GAGGGGGCGG AAACGGTATT TGTTGCCTTA AATAAATCGA AAGAACCTCT TCGTTCTTTC
CTAATTAACA ACACCCCTAA ACCACAAATT CAAAGTTTTT ATAAAATTTC ACAGAAAACA
TTCCCTCCGG AACTTCGCCA ACAATTGACC CCTTCTGATT TTGTAGTCGT CATTCCTGCT
TTCATCATGG GCCAAATTAA GAATGCTTTT GAAATTGGGG TTTTGATTTA TTTGCCTTTC
TTTGTCATCG ATTTGGTAAC CGCAAACGTT TTGGTTGCTA TGCAGATGAT GATGCTTTCT
CCACTGTCCA TCTCTCTTCC TCTTAAGCTT CTTCTTGTGG TCATGGTAGA TGGATGGACC
TTACTACTCG AAGGATTGAT GATTAGTTTT AAATAA
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| Protein sequence | MRLICRIFFF LCVLSAPQGF SNVCSDASCS KVQGSSSCRP CGATPQQEIQ DSPGTPPPPF
RCPSYRQPVE AQDLLASQED LSSGAFSDTY PDLTTQAVII LFLALSPFLV MLLTSYLKII
ITLVLLRNAL GVQQTPPSQV LNGIALILSI YVMFPTGMAM YNDAKKGIES DAVPRDLFSA
EGAETVFVAL NKSKEPLRSF LINNTPKPQI QSFYKISQKT FPPELRQQLT PSDFVVVIPA
FIMGQIKNAF EIGVLIYLPF FVIDLVTANV LVAMQMMMLS PLSISLPLKL LLVVMVDGWT
LLLEGLMISF K
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