Gene TC0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0814 
SymbolrplD 
ID1246181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand- 
Start bp947323 
End bp947991 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID637061626 
Product50S ribosomal protein L4 
Protein accessionNP_297187 
Protein GI15835428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0012008 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTAT TATCAAAGTT TGATTTTTCT GGAAAAGAGT CAGGGAAAGT TGAATTGCCC 
GATGCCTTCT TTGCTGAAGG GAAAGAGCAA TCAGTGAAAG ATTATTTAGT GGCCATTCAG 
GCCAATAAAC GTCAGTGGAG CGCTTGTACA AGAGGGCGAT CGGAAGTCAG TCACTCCACT 
AGGAAGCCTT TTAGACAAAA AGGAACGGGG AATGCTCGTC AAGGTTGTTT AGCTGCTCCT 
CAATTTAGAG GAGGAGGTAT TGTTTTTGGG CCTAAACCAA AATTTGATCA GCATGTTCGC 
ATCAATAAAA AAGAGAGAAG AGCTGCTATT AGATTGCTGT TGGCTCAGAA AATTCAAACA 
GGCAAGCTCA TTGTTGCAGA TAATTCTGTA TTCATTAGTA GCTTAAATGC GCCTAAAACA 
AAAGAAGCTT TGAGATTTTT GAAAGAGTGC AACGTGGAGT GCCGCGGAGT CTTGTTCGTT 
GACGGACTAG ATCATGTTGG AAGCAACGAG AATTTGAGAT TGAGTGTAAG AAATCTAGCT 
GCTGTAAGAG GATTTACTTA CGGAGAGAAT ATCAACGGGT ATGACATTGC CGCTGCTAGA 
AATATTGTGG TTTCAGAGAA AGCTTTGGAA CTACTTGTCG AGAATCTTGT CTCTACAACA 
AAAGATTAA
 
Protein sequence
MVLLSKFDFS GKESGKVELP DAFFAEGKEQ SVKDYLVAIQ ANKRQWSACT RGRSEVSHST 
RKPFRQKGTG NARQGCLAAP QFRGGGIVFG PKPKFDQHVR INKKERRAAI RLLLAQKIQT 
GKLIVADNSV FISSLNAPKT KEALRFLKEC NVECRGVLFV DGLDHVGSNE NLRLSVRNLA 
AVRGFTYGEN INGYDIAAAR NIVVSEKALE LLVENLVSTT KD