| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0735 |
|---|
| Symbol | uppS |
|---|
| ID | 1246098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 877237 |
|---|
| End bp | 877998 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637061544 |
|---|
| Product | undecaprenyl pyrophosphate synthase |
|---|
| Protein accession | NP_297109 |
|---|
| Protein GI | 15835350 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTAG CTTTAGAACA GGCGAACCCA ATTCAAGAAA ATTTTCTACG AGAGCCCCCT
CTCCCTAAGC ATATCGCCAT CATCATGGAT GGAAACCGTC GATGGCAAAA GAAACATGAA
CAATTTTGTA AAAGCAATGC CATCTCCGGT CACCGTCGAG GAGCTGACAG CATCCCGCAA
ATTGTTGATA CAGCTGCACT CCTAGGAGTA GAAGCTCTCA CCTTGTTCGC GTTCTCTACA
GAAAACTTTT CTAGATCAAA AACAGAAGTC GCTGAATTAT TTTCCTTATT TAACTCACAG
TTGCATAGTA AACTCTCTTT TCTGCACGAT CGGGAAATCC GGCTACGATG TATCGGAGAC
TTATCCAAAC TCCCTCAAGA ATTGCAAAAT AACATTGCAA AAGCAGTCTC CGCCACAACA
CACTACTCCC ATATGGAATT AATTTTTGCG ATTAACTATG GAAGTAAAAA CGAATTAGTT
CGTGCGTTCA AGGAATTGCA TCAGGACCTT ACAAACAAAA AAATCTCTAT CAATGAAATT
TCTGAAGAGC TTATCAGCTC TTACTTAGAC ACATCTGGCC TCCCTGACCC GGATTTGCTT
ATTCGTACAG GAGGTGAAAT GCGTGTCAGT AATTTTCTCT TATGGCAAAT AGCTTATACA
GAACTTTACG TAACAGATGT GTTATGGCCT GATTTCACGG CCCACGACTT GTTAGAAGCA
ATTAAAACAT ACCAACAACG ATCAAGGCGC GGAGGGAAAT AA
|
|---|
| Protein sequence | MSLALEQANP IQENFLREPP LPKHIAIIMD GNRRWQKKHE QFCKSNAISG HRRGADSIPQ
IVDTAALLGV EALTLFAFST ENFSRSKTEV AELFSLFNSQ LHSKLSFLHD REIRLRCIGD
LSKLPQELQN NIAKAVSATT HYSHMELIFA INYGSKNELV RAFKELHQDL TNKKISINEI
SEELISSYLD TSGLPDPDLL IRTGGEMRVS NFLLWQIAYT ELYVTDVLWP DFTAHDLLEA
IKTYQQRSRR GGK
|
|---|
| |