Gene TC0688 details

Gene Information

• Locus tag: TC0688
• Symbol: lspA
• ID: 1246049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 819655
• End bp: 820158
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637061495
• Product: lipoprotein signal peptidase
• Protein accession: NP_297062
• Protein GI: 15835303
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCC GCTCTCTATC GACCTTCCTC ACCTCTTTTC TCCTAGTCTC TCTTGATTGG 
GTCTCAAAAC TAGTTGTGTT ACTAAAGAGC TGTCAGCTCT CCCCCCACTC CCCTGCTTTA 
CTTTATAGCT ATGTGTGGGG ACATTTCTCT TTTCTCATTG TGCCCTCTTT CAATGAGGGA 
GCGGCCTTTG GCCTATTTGC TCAATACAAA ATACCCCTGC TCATTTTCAG AGTTTTCGTT 
ATCTTATGTC TTTTTTTATT CTTAGGAATT AAATTTAGAT CTTTACATAT TAGAACGCGA 
ATCGCTTTAA CCCTAATTCT TGCAGGAGCT CTGGGTAACG TTGGAGACAT CTTATTTCAT 
GGTAAGGTGG TCGATTTCCT CTCTATTAAC TACTATTCTT GGAGTTTCCC CTCCTTCAAT 
TTAGCAGATG CTTTCATCTC CCTTGGCACT CTCCTCCTTG TCGGGCATCT GTATTTCAGC 
AAAGAAGATA AAAAATATTT TTAA 

 

Protein sequence

MTTRSLSTFL TSFLLVSLDW VSKLVVLLKS CQLSPHSPAL LYSYVWGHFS FLIVPSFNEG 
AAFGLFAQYK IPLLIFRVFV ILCLFLFLGI KFRSLHIRTR IALTLILAGA LGNVGDILFH 
GKVVDFLSIN YYSWSFPSFN LADAFISLGT LLLVGHLYFS KEDKKYF