Gene TC0580 details

Gene Information

• Locus tag: TC0580
• Symbol: atpD
• ID: 1245939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 693242
• End bp: 693853
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637061385
• Product: V-type ATP synthase subunit D
• Protein accession: NP_296956
• Protein GI: 15835197
• COG category: [C] Energy production and conversion
• COG ID: [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D
• TIGRFAM ID: [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTCAC AAATAAAATT AACGAAAAAT TCTTATCGAG CTGAGAAACA AAAGCTTAAT 
CTATTGGGGA TGTATCTTCC TACATTGAAG TTGAAGAAGG CTTTATTGCA GGCTGAAGTA 
CAATCTGCAA TGCGTTCCGC AGCAGAAAGT ATGGCAGCTA ATGAACAGGC TCGAGATAGG 
ATGCATGCTT TTGCAGAACT TTTCAGCATC CCCCTCTATA CGGATGCTGT TGAGCAATGT 
TTTTCTATCG ATATTTTTGA AAAGGATGTT GAGAATATCG CTGGAGTGGA AGTTCCTTTG 
TTGAAGCGCG TTGTACTGAC TTCTCTAGAA TATTCTTTGC TGGATACCCC TATTTGGATA 
GATTCTTTAA TTGCATCCGC AAAAGAGTAT GTTCTGAGTA AAATTTATGC TGAAAATGCT 
CAAGAGAGAC TGCGTCTTTT GGAAGAAGAG CTTCGTCGTG TCTCCATTCG GGTTAATCTT 
TTTGAAAAAA AATTAATACC GACAACTTCG CAAACGATTA AAAAGATAGC TATTTTCTTA 
AGTGATCGGA GTATTACCGA TGTGGGTCAG ATGAAAATGG CTAAGAAAAA AATTCAGCAG 
CATAAGGAGT AG 

 

Protein sequence

MSSQIKLTKN SYRAEKQKLN LLGMYLPTLK LKKALLQAEV QSAMRSAAES MAANEQARDR 
MHAFAELFSI PLYTDAVEQC FSIDIFEKDV ENIAGVEVPL LKRVVLTSLE YSLLDTPIWI 
DSLIASAKEY VLSKIYAENA QERLRLLEEE LRRVSIRVNL FEKKLIPTTS QTIKKIAIFL 
SDRSITDVGQ MKMAKKKIQQ HKE