Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TC0478 |
Symbol | |
ID | 1245834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlamydia muridarum Nigg |
Kingdom | Bacteria |
Replicon accession | NC_002620 |
Strand | + |
Start bp | 580335 |
End bp | 581153 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637061280 |
Product | hypothetical protein |
Protein accession | NP_296855 |
Protein GI | 15835096 |
COG category | [R] General function prediction only |
COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.218864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC CTAGTTACTT TCCTCACTCA AAAAAAAACT TCGACATCCC TCTATTGGAT AATGTCTCTT CTCCTGGAAT TTTGCATATT CCCTCTTCCC AAGAAAAAGA ATTTCCTTTG GTTATTGTAT TACACGGACT AGCTTCTAGT AAAATTGGAA CAAAACGTTC TTATCTTCAT CTAGCTAATC AGCTTGTTCA AGCAGGTATT GCGGTATTAC GAGTAGATTT ACCCGGGCAT GGTGATGCAG AAGGCTTCAT CCATGAATTT TCTCTTACAG ACTACATTCA AGCCTCTCAA CAAATCATAG AATTTGGTCT CTCTCTTCCT CAAATTCATT CTGTTGCTTT ATTTGGCTCG TCCCTTGGAG GTAGCTTGTC CCTACTGCAT CTTCCTAGCT TTCCAGCCAT TCAACATGTG GCCGTTTGGG CACCCACAAT TCAAGGATCT TTATGGTTAG AAGATACCTT GCATTCTTCA TCACTTTCTT CAAAGCCTTC TCCTGAAATT TTTTCTTATC AAGGAGTTCC TCTTGGAAAA AATTTTTGTT CACAGTTTGT TAATTTAGAT GTGTTAAAGA CTTTTTCTAC TGCTACTATC TCAGAACACA CTTCGATTCT TTACTTACAA GGAGAAGAGG ATCCTATTAT CTCCTTACGT CATCAGGCTC TTTTTGCAAA AAACTTTGTA GGAAAAGCTT CTTATCGTAT CTATCCTAAA ATGAATCATC ATCTTTGCGT GTATTCTGAG GCTTTTCAAG ACCTTATCAA TTGGCTAAAA CATCAATTAT TAGGGACACC ATGGAGTTAC TCTCTGTAA
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Protein sequence | MKQPSYFPHS KKNFDIPLLD NVSSPGILHI PSSQEKEFPL VIVLHGLASS KIGTKRSYLH LANQLVQAGI AVLRVDLPGH GDAEGFIHEF SLTDYIQASQ QIIEFGLSLP QIHSVALFGS SLGGSLSLLH LPSFPAIQHV AVWAPTIQGS LWLEDTLHSS SLSSKPSPEI FSYQGVPLGK NFCSQFVNLD VLKTFSTATI SEHTSILYLQ GEEDPIISLR HQALFAKNFV GKASYRIYPK MNHHLCVYSE AFQDLINWLK HQLLGTPWSY SL
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