Gene TC0397 details

Gene Information

• Locus tag: TC0397
• Symbol: rpe
• ID: 1245749
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 458899
• End bp: 459585
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637061196
• Product: ribulose-phosphate 3-epimerase
• Protein accession: NP_296775
• Protein GI: 15835016
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC AAGGGGTGTT AATTGCTCCA TCTATTATGG GGGCCGACTT GGCTTGCCTA 
GGGGATGCAG CACGAAATAT AGAAGAGTCT GGGGCAAATC TTATTCATAT AGATGTCATG 
GATGGGCATT TTGTTCCGAA TATTACCTTT GGTCCCGGTA TTATTGCCGC AATCAATCGG 
TCAACAGATC TATTCCTTGA AGTTCATGCT ATGATTTATA CGCCGTTTGA ATTTGTAGAG 
GCTTTTGTTA AAGCTGGAGC AGATCGTATT ATTGTGCACT TTGAGGCAGC AGAAAACCTT 
AAAGAAATTC TTGATTATAT TCGAAAATGT GGAGTGCAGG CAGGGATCGC TTTTTCTCCA 
GAGACTTCTA TTGAGTTCAT CTCGGCTTTT ATACCTTTGT GTGATGTCAT TCTACTTATG 
TCTGTACAAC CGGGATTTTG TGGTCAAAAA TTTATTCCTG ATACGATAGA AAAGATTCGA 
TTTGTTAGAC AGGCAATACA AACTCTTGGG AAAGAGGGAA GTTGCTTGAT CGAAGTTGAC 
GGTGGTATTG ATGAGGAGTC TGCCCGAGCA TGTAGAGAAG CCGGTGCCGA TATTTTGGTT 
GCCGCTTCTT ATTTTTTTAA AAAAGACTCT ATAAATATGA AAGAAAAAGT TTTGTTACTT 
CAAGGGGAAG AACATGGTGC TAAGTAG 

 

Protein sequence

MKKQGVLIAP SIMGADLACL GDAARNIEES GANLIHIDVM DGHFVPNITF GPGIIAAINR 
STDLFLEVHA MIYTPFEFVE AFVKAGADRI IVHFEAAENL KEILDYIRKC GVQAGIAFSP 
ETSIEFISAF IPLCDVILLM SVQPGFCGQK FIPDTIEKIR FVRQAIQTLG KEGSCLIEVD 
GGIDEESARA CREAGADILV AASYFFKKDS INMKEKVLLL QGEEHGAK