Gene TC0292 details

Gene Information

• Locus tag: TC0292
• Symbol: prfA
• ID: 1246462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 350158
• End bp: 351237
• Gene Length: 1080 bp
• Protein Length: 359 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637061092
• Product: peptide chain release factor 1
• Protein accession: NP_296671
• Protein GI: 15834912
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.694941
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTAA AAGTTTTAGA GTGTTTGAGA CGCCTTGAAG AAGTCGAAAA GCTAATATCT 
GATCCAAATA TTTTTAGTAA TCCCAAGGAA TATAGTTCTT TAAGTAAGGA GCATGCTCGT 
CTTTCGGAGA TTAAAAATGC TCACGAATCG ATTCTTGCGG CAAAAAAAAT TCTTCATGAT 
GACAAGTTAG CCTTGTCAAC AGAGAAGGAT CCGGAGATGA TTGCTATGTT GGAAGAGGGT 
ATTCAAGGAG GAGAGGAGTC CTTAGAACGT CTGTCTAAGC AATTGGAAAA CCTTCTCATC 
CCACCTGATC CGGATGATGA TTTAAGTGTC ATTATGGAGT TGCGAGCAGG GACAGGAGGA 
GATGAAGCGG CTCTTTTCGT AGGCGATTGT GTGCGAATGT ATCATCTTTA TGCATCCATC 
AAAGGGTGGC AGTGTGAAGT GCTTTCTGCC TCGGAGTCCG ATCTTGGTGG ATACAAAGAA 
TATATCATGG GAGTTTCAGG GACCTCTGTG AAACGATTCT TACAATATGA GGCAGGGACG 
CATCGTGTCC AAAGAGTTCC GGAGACGGAA ACTCAGGGAA GAGTGCATAC TTCGGCCGTG 
ACTATTGCTG TCCTTCCTGA ACCTGCAGAA GATGACGAGG AAGTTTTTAT TGATGAGAAG 
GATCTACGTA TAGATACCTT CCGTTCTTCA GGAGCTGGAG GGCAGCACGT AAACGTTACA 
GATTCTGCCG TACGTATTAC GCATATTCCT ACTGGCGTGG TGGTTTCCTG TCAAGATGAG 
CGTAGTCAAC ATAAAAATAA GGCGAAAGCT ATGCGAGTGT TGAAGGCGCG TATTCGAGAT 
GCGGAAGTGC AGAAGCGAGA ACAGGAGGCT TCTGCTATGC GTTCAGCGCA AGTAGGGAGT 
GGGGATCGCT CAGAAAGAAT TAGGACTTAT AATTTTCCTC AAAATCGTGT GACTGATCAT 
CGAATCGGTC TGACTTTATA TAACTTGGAT CGTGTAATGC AGGGAGAGTT GGATATGATT 
ACAACAGCTC TTGTTTCCCA TGCACATCGC CAACTGTTCG GTCATGAAGA GACTAATTAA 

 

Protein sequence

MEVKVLECLR RLEEVEKLIS DPNIFSNPKE YSSLSKEHAR LSEIKNAHES ILAAKKILHD 
DKLALSTEKD PEMIAMLEEG IQGGEESLER LSKQLENLLI PPDPDDDLSV IMELRAGTGG 
DEAALFVGDC VRMYHLYASI KGWQCEVLSA SESDLGGYKE YIMGVSGTSV KRFLQYEAGT 
HRVQRVPETE TQGRVHTSAV TIAVLPEPAE DDEEVFIDEK DLRIDTFRSS GAGGQHVNVT 
DSAVRITHIP TGVVVSCQDE RSQHKNKAKA MRVLKARIRD AEVQKREQEA SAMRSAQVGS 
GDRSERIRTY NFPQNRVTDH RIGLTLYNLD RVMQGELDMI TTALVSHAHR QLFGHEETN