Gene TC0289 details

Gene Information

• Locus tag: TC0289
• ID: 1246459
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: -
• Start bp: 346755
• End bp: 348638
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637061089
• Product: signal peptidase, putative
• Protein accession: NP_296668
• Protein GI: 15834909
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0681] Signal peptidase I
• TIGRFAM ID: [TIGR02227] signal peptidase I, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAGCA ATTACATGAG TCGCTTATAT TCCTTGAATA AGAGTCGTCG CATTCTTCAT 
TCCTCCTATA AATTGCTGAA AAATAAGAAA ATGCTCTCTT ATCCTGATAC TCAGAAGGAA 
TTACTTGAAA TCTTAAAACA GCTTGAAGAA GCCATTTTGG ATCAAAATAG AGAAGACGCC 
TCTCTTTTCG CTAAACAAGC TCAAGCTATT CAAAAACGAT TCCCTCGGTC AAAAATACAG 
GCAACTTTTG ATCTCATCTA TGCTTTAGCA TTTGCTGCAG TTCTTGCTTT TTTAATTCGT 
CAATTCTGGT TTGAACTATA TGAAGTTCCT ACAGGATCAA TGCGACCTAC AATCCTTGAA 
CAAGATCGGA TTCTGGTCTC TAAAACTACA TTTGGACTTC GCCTGCCTTT TAGTAATGAA 
AGTATTGGCT ATACACCGGA GACTATTACC CGAGGAGAAC TTGTTGTCTT TACCGTTGGA 
GACCTTCCCA TCCCGAACGC TGACACCAAA TATTTCGGAA TTATACCTGG GAAAAAACGT 
TATATAAAGC GGTGCATGGG CAAACCTGGA GACACTTTAT ACTTTTATGG GGGGAAAATT 
TATGGAATAG ATCGTAATGG CGTCCCTATC ACCACAAAAA ATACAGAAAA CCTTTATCAC 
ATCCCCTATA TCTCTTTTGA TGGCGTTACA GAAATCGTTA ATCATTCAGA TGATCAAACT 
GATGTGATCT TTAACCAATT CCATACTCCC TGTGGGAAAA TTTCCTTCCC CCACTATTCT 
CATGGGCAAT TTTTCTACAA AGATGCTTGG CACAAAGACA CCCCCTATGC TTTAAAAGAC 
CTTCATACCG AGCCTTTAAG CTATGCAGAC CTATTTGGCA TAAAAAATTT TGCAATGGTG 
CGTATTCTTA CAAAAAAACA AGCTGCGCTT ACTCACGTAC TTTCTTCTCC TTTAGCAGAT 
GCCTACTTAG AAATTGCACA TACTCCTAAT GTCTCTTATC CTCATCCGCA TTTGCGTCCG 
TTAGAAACGC AACTTATCCC CACTATTGAG CCTATGAAAA CTCTCCTTCC TCTAAGGAAG 
GAGCACATGC ATTTGATCCG TAATAACCTT ACAACATCTC GTTTCACAGT TATTGATGGA 
TATGCCTACA AATATCAACC CACTCCAATT AATACTTCTG GCATAGCAAA AATATTTGCT 
CTTCCAATGC CAAACATTCC GGATGGCTGT TATGAGTTTT CTAAAGGGGA TGTGTTTAAA 
ATTAGTATAG GAGGTTTCCG CACTAAACTG AAACAACCCC ATCCTTTGAC GCAATTGAGC 
CATTCTCAGA TTATTGATTT ATTCAACTGC GGCATTAGTT TTCATACAGT CTATATCCCC 
AAAAATCCTC AATACGCCCC TTTTCCTAAT CGTTATGCTT TTTTCAATCA GGGAAACCTA 
TTTGTTATGG ATTCCCCAGT TTTCATTGAC AGTGATCCTT CATTACAAAA ATTTATCTTG 
GCGGAAAAAG AAAAGGAGCT TCAGTCCTCT GAAGAAAAAC CCTACATTGC CTTCATTGAT 
CGAGGACCTC CCCCTGAATC TGCAGAAGAA TTTACTTCTT TTATTACAAA TTTTGGACTT 
AAAATACCGG AAGGGCATGT GCTCGTTTTA GGAGATAATT GTCCTATGAG TGCAGACAGC 
CGTGATTTTG GGTTCGTTCC CGTAGAAAAC CTTTTAGGAT CCCCGGTAGC TATTTTTTGG 
CCTATTAACC GTATAGGATC ATTATCTTCT AGTATCACCC CGTTGAGCTT ACCTGGTTAT 
CTTGTTAATG GATTAGCCTT AGGAGCTCTT ATTTACTTTG TGGGTGCGTG GTATTATCGA 
AAGAATCACA GGTTATTCCC CTAA 

 

Protein sequence

MTSNYMSRLY SLNKSRRILH SSYKLLKNKK MLSYPDTQKE LLEILKQLEE AILDQNREDA 
SLFAKQAQAI QKRFPRSKIQ ATFDLIYALA FAAVLAFLIR QFWFELYEVP TGSMRPTILE 
QDRILVSKTT FGLRLPFSNE SIGYTPETIT RGELVVFTVG DLPIPNADTK YFGIIPGKKR 
YIKRCMGKPG DTLYFYGGKI YGIDRNGVPI TTKNTENLYH IPYISFDGVT EIVNHSDDQT 
DVIFNQFHTP CGKISFPHYS HGQFFYKDAW HKDTPYALKD LHTEPLSYAD LFGIKNFAMV 
RILTKKQAAL THVLSSPLAD AYLEIAHTPN VSYPHPHLRP LETQLIPTIE PMKTLLPLRK 
EHMHLIRNNL TTSRFTVIDG YAYKYQPTPI NTSGIAKIFA LPMPNIPDGC YEFSKGDVFK 
ISIGGFRTKL KQPHPLTQLS HSQIIDLFNC GISFHTVYIP KNPQYAPFPN RYAFFNQGNL 
FVMDSPVFID SDPSLQKFIL AEKEKELQSS EEKPYIAFID RGPPPESAEE FTSFITNFGL 
KIPEGHVLVL GDNCPMSADS RDFGFVPVEN LLGSPVAIFW PINRIGSLSS SITPLSLPGY 
LVNGLALGAL IYFVGAWYYR KNHRLFP