Gene TC0282 details

Gene Information

• Locus tag: TC0282
• Symbol: cydB
• ID: 1246452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlamydia muridarum Nigg
• Kingdom: Bacteria
• Replicon accession: NC_002620
• Strand: +
• Start bp: 337131
• End bp: 338186
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637061082
• Product: cytochrome D ubiquinol oxidase, subunit II
• Protein accession: NP_296661
• Protein GI: 15834902
• COG category: [C] Energy production and conversion
• COG ID: [COG1294] Cytochrome bd-type quinol oxidase, subunit 2
• TIGRFAM ID: [TIGR00203] cytochrome d oxidase, subunit II (cydB)

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTAG CAACGATTCT TCCTGTTATT TGGTATGCCA TTCTTTGTAT TGCAGTATTT 
GCTTATGCTT TAGGGGATGG GTTTGATTTG GGATTAAGCA CGATCTATTT TCTTTCGAAA 
GAAGAGAAAG AGCGTCGTTT GTTATTAAAT TCGATAGGCC CTGTCTGGGA TGGTAATGAA 
GTTTGGTTTG TGATCATATT TGCAGGGTTA TTTGCAGGAT TTCCATCTGC TTATGGAACA 
TTGCTTTCTA TCTTTTACAT GCCTATTTGG ACAATGGTCA TGTTATACGT GTTTCGAGGC 
TGTTCTTTAG AGTTCCGAAG TAAGGCTGAG TCTCGTCGTT GGAAGTTTTT CTGGGACATT 
CTTTTTTCTG CTTCAGGGAC GTTTATTAGC TTCTTTCTCG GAACTTTATC TGGAAATTTA 
TTGCTTGGAC TGCCAATAGC TCCGGAGACT TCTTACAGTT CTTTGTCTTG GGGACTATTT 
TTTCGACCTT ATTCTGTATT ATGCGGGCTA TTTGTAGTTG CTGCCTTCGC TTTACATGGG 
ATTAGTTTCG CTTTGACTAA AACAGCAGAA GGGTTTCAAT TACGATTGAA AAATCGGTTC 
TATTATGTTC TATCTGCTTA CTTAGTTTTG TATCTTGGTT TACTTATCGC TACAATGCTA 
GGGAGACCTC ATGCTATTGG AGTTTGTTGT CGTTTGGGAA TTGGGACGGG TATTCCCGCT 
TATCCATTAT TGATTTTATT GGCTGTAGCA ACATTTTCTT GTTGTTATGC AGAAAAGAAA 
GCTATGGATG TCTCTAAATA CGGCAAAGCT TTTGCTTTCT CCTGTATTAA TTTGTTATTC 
CCAATATTAG CTTATAACGT ATTGCTTTTC CCTAATTTGC TAGTGTCTTC TGTAGATGGT 
CGTTACACTA TAACGATTTT TAATGCAGCT GTGGACCCTA AGGCTTTACA GCACCTCATT 
ACTATTGTTT TAATCGGTCT TCCCTTTGTC ATTGCTTACG CAGTATACGT GTATCGAGTG 
TTCAGAGGAA AAACAGATTT CCCTTCAATT TATTGA 

 

Protein sequence

MELATILPVI WYAILCIAVF AYALGDGFDL GLSTIYFLSK EEKERRLLLN SIGPVWDGNE 
VWFVIIFAGL FAGFPSAYGT LLSIFYMPIW TMVMLYVFRG CSLEFRSKAE SRRWKFFWDI 
LFSASGTFIS FFLGTLSGNL LLGLPIAPET SYSSLSWGLF FRPYSVLCGL FVVAAFALHG 
ISFALTKTAE GFQLRLKNRF YYVLSAYLVL YLGLLIATML GRPHAIGVCC RLGIGTGIPA 
YPLLILLAVA TFSCCYAEKK AMDVSKYGKA FAFSCINLLF PILAYNVLLF PNLLVSSVDG 
RYTITIFNAA VDPKALQHLI TIVLIGLPFV IAYAVYVYRV FRGKTDFPSI Y