| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0257 |
|---|
| Symbol | glgB |
|---|
| ID | 1246427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlamydia muridarum Nigg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002620 |
|---|
| Strand | + |
|---|
| Start bp | 299702 |
|---|
| End bp | 301915 |
|---|
| Gene Length | 2214 bp |
|---|
| Protein Length | 737 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637061057 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | NP_296636 |
|---|
| Protein GI | 15834877 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCTT TCTTCTTAAA TACACAACAT GTAGAGCTTC TTGTTTCAGG GAAACAGAGT
AGCCCGCAAG ATCTTTTAGG AATTGTTTCT GAAAGTCTGA ATCAGGATCG GATAGTTCTT
TTTCGTCCTG GAGCAAAGAC TGTTTTTGTT GAGCTGCAAG GAAAGATTCA GCAAGCAGAA
TCGCATCATT CAGGGATTTT TTCTCTCCCT GTCACGAAAG GAATTTCTCC TCAAGACTAT
CGAGTGTATC ATCAAAATGG TCTATTAGCT CATGATCCCT ATGCATTTCC TTTGCTTTGG
GGAGAAATCG ATTCTTTTTT ATTCCATGAA GGGACCCATC AGCATATCTA TGATCGCATG
GGTGCTATTC CTTGTGAAAT TGGAGGGGTG CCTGGAGTGC GGTTTGTTAT TTGGGCTCCG
CATGCTCAAA GAGTTTCTGT TGTTGGAGAT TTTAACTGCT GGCATGGACT TGTTAACCCT
CTTCATAAAG TTTCAGATCA AGGAGTTTGG GAGTTATTTG TTCCTGGCCT CACGGCAGGT
TCTTGTTATA AGTGGGAAAT AGTTACAGCA TCTGGTCAGG TTCTTATCAA ATCTGATCCT
TATGGTAAAT TTTTTGGATC TCCTCCGCAA AGCGTTTCTG TTGTTGTGGA TGATCGCTAT
GAGTGGGGAG ATAAAGAGTG GTTAGACGAG CGCTCTAAAA AAGCCGAAGG CCCTATGAAT
ATTTATGAAG TGCATGTAGG GTCTTGGAGA TGGCAAGAAG AGCAGCCTTT AAATTATAGA
GAGTTAGCTG ATCAACTGTC CCTCTATTGT AAGCAGATGC ATTATACGCA TGTGGAGTTG
CTCCCTGTAA CAGAGCATCC TTTGAATGAA TCTTGGGGAT ATCAAACAAC AGGATATTAT
GCTCCAACTA GTCGTTACGG TTCTTTTGAG GATTTACAGT ATTTTATAGA TACCATGCAT
CAGCATGGTA TTGGGGTTAT TTTGGACTGG GTTCCGGGAC ATTTCCCTGT AGATTCTTTT
GCAATGAGTA ATTTTGATGG TACACCATTA TACGAGTATA CTAGAAATCC TAGTCCATTG
CATCCTCATT GGCATACATA TACCTTTGAT TATGCCAAGC CTGAGGTTTG TAATTTCTTA
TTAGGGAGTG CTCTATTTTG GATAGATAAA ATGCATATAG ATGGTATCCG AGTCGATGCT
GTTTCTTCCA TGCTTTATCT TGATTATGGA CGAAATCCAG GGGAGTGGAT TCCGAATCGC
TATGGGGGAA GAGAAAACCT TGATGCAGTC CGTTTTCTTC AGCAATTTAA CACAATCATT
CATGAGAAGT ATCCAGGTGT CTTGACCTTT GCTGAAGAGT CTACAACATT CCCCAAGATC
ACTGTGTCTG TGGAAGAAGG AGGATTAGGT TTTGATTATA AATGGAATAT GGGCTGGATG
CATGATACAT TGCATTATTT TGAAAAAGAT TTTCCTTACC GGCCATATCA TCAAAGCGAT
CTGACTTTCC CTCAGTGGTA TGCCTTTAGT GAAAGGTTCT TGCTACCATT TTCTCATGAC
GAGGTAGTTC ATGGGAAACG GAGTTTAATT GGTAAAATGC CTGGGGATGC CTGGAGACAG
TTCGCTCAGT TACGTTTGCT ATTGGGGTAT CAAATCTGTC AACCAGGGAA GAAATTGCTC
TTTATGGGCG GAGAATTTGG GCAAGGACGA GAGTGGTCGC CGAATCGCGA ATTGGATTGG
GATTTATTGG ATATCCATTA CCATCAGGGA GTACATTTAT GCTCTCAAAA GTTAAACTCC
TTATATGTGA ATAGCCCTCA GTTGTGGAAA GGAGATCATT TACCACAGAG TTTTCGTTGG
ATAGATTTTA GTGATACTCG TAATGGTGTT GTTGCTTATT TGCGATTTGC TTCTGATGAG
GATAAGGAAG CATTGCTTTG CGTGCATCAT TTTGGCGTGA ATCATTTCCT TCATTACATT
TTACCGATGC TCCCTATGAA ATCGTGTTCT TTGCTTATGA ATACAGACGA TTTAGCGTTT
GGGGGATCGG GCAAAGGTTT TCGAAATCCC AAAATGTTAA CTCCTGAAAT GGTTAGAAAA
GAGAAAACCT CTTCAGAACT AGCTCCTCTG GATGATGATG GTAGCGTTGC TTGGGGATTA
GATATCGAGA TGCCTCCGTC AGCAACGCTC ATTTTTTCTG TAACACTACA ATAA
|
|---|
| Protein sequence | MDPFFLNTQH VELLVSGKQS SPQDLLGIVS ESLNQDRIVL FRPGAKTVFV ELQGKIQQAE
SHHSGIFSLP VTKGISPQDY RVYHQNGLLA HDPYAFPLLW GEIDSFLFHE GTHQHIYDRM
GAIPCEIGGV PGVRFVIWAP HAQRVSVVGD FNCWHGLVNP LHKVSDQGVW ELFVPGLTAG
SCYKWEIVTA SGQVLIKSDP YGKFFGSPPQ SVSVVVDDRY EWGDKEWLDE RSKKAEGPMN
IYEVHVGSWR WQEEQPLNYR ELADQLSLYC KQMHYTHVEL LPVTEHPLNE SWGYQTTGYY
APTSRYGSFE DLQYFIDTMH QHGIGVILDW VPGHFPVDSF AMSNFDGTPL YEYTRNPSPL
HPHWHTYTFD YAKPEVCNFL LGSALFWIDK MHIDGIRVDA VSSMLYLDYG RNPGEWIPNR
YGGRENLDAV RFLQQFNTII HEKYPGVLTF AEESTTFPKI TVSVEEGGLG FDYKWNMGWM
HDTLHYFEKD FPYRPYHQSD LTFPQWYAFS ERFLLPFSHD EVVHGKRSLI GKMPGDAWRQ
FAQLRLLLGY QICQPGKKLL FMGGEFGQGR EWSPNRELDW DLLDIHYHQG VHLCSQKLNS
LYVNSPQLWK GDHLPQSFRW IDFSDTRNGV VAYLRFASDE DKEALLCVHH FGVNHFLHYI
LPMLPMKSCS LLMNTDDLAF GGSGKGFRNP KMLTPEMVRK EKTSSELAPL DDDGSVAWGL
DIEMPPSATL IFSVTLQ
|
|---|
| |