| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0255 |
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| Symbol | xerD |
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| ID | 1246425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 297547 |
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| End bp | 298452 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637061055 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | NP_296634 |
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| Protein GI | 15834875 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0225677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCATGC TTTTCCCCCT TCATCAACAG TTGATAGAAC AGTTTACAAT CTTTCTTTCT
GTCGACCGCG GTATCGCCCC TCTTTCTGTT CAAGCTTATT GCCAAGATAT CCTTCTTTTT
TTGCAACGCG TACCCATTGA AACTACAGAC ATGATCAACC AAGAGAGTGT TTTTCTTTTT
GTAGAAAAAT GTCATCAAGC AAAAGAATCA GAAACGACTT TAGCAAGGCG ATTGATTGCC
CTAAAAGTGT TCTTCCATTT CCTAAAAGAC GCTAAGCTTA TCCATCAGCA GCCTTTCATA
GAACATCCTA AAGTCTGGAA AAGGCTTCCT TCTATTCTTT CAACAGAAGA AGTCAACTCC
CTACTGAATC AGCCGCTTAA TACTCTGAAT TTAGATGCTT ATATAGCAAA CAGAGATACG
GCTATCCTTT ATACATTTTA TGCTACAGGA ATTCGTGTAT CCGAACTCTG TGATCTTTGT
ATTGGAGATA TCAGTGATGA TTTTATTCGT GTGACTGGAA AGGGCAGGAA AACTCGTCTC
GTTCCTATTA GTATCAAAGC ACGACAGACT ATTGATTCGT ACTTGACCAT GTTTAGAGAA
AGATTTCAAA AGAAAAATCC CTCTGAAGAA CATGTATTTT TGTCCATCAG AGGGAAAAAA
TTAGAACGCT CTTGTGTATG GAAGCGCATT ACTTTCTATG CAAAACTCGT CACAACAAAA
CACATCTCAC CACACTCTTT GCGGCACGCA TTTGCCACAC ACCTACTCAA CAACCAAGCA
GATCTCCGAA TTATTCAAGA AATGCTAGGA CATGCACGCA TCTCTTCCAC GGAAATCTAC
ACGCATGTAG CTTCTGAGAG CATTATTGAA AAATTTCACA CCCATCATCC GAGGAGTAGT
TCCTAG
|
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| Protein sequence | MSMLFPLHQQ LIEQFTIFLS VDRGIAPLSV QAYCQDILLF LQRVPIETTD MINQESVFLF
VEKCHQAKES ETTLARRLIA LKVFFHFLKD AKLIHQQPFI EHPKVWKRLP SILSTEEVNS
LLNQPLNTLN LDAYIANRDT AILYTFYATG IRVSELCDLC IGDISDDFIR VTGKGRKTRL
VPISIKARQT IDSYLTMFRE RFQKKNPSEE HVFLSIRGKK LERSCVWKRI TFYAKLVTTK
HISPHSLRHA FATHLLNNQA DLRIIQEMLG HARISSTEIY THVASESIIE KFHTHHPRSS
S
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