| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TC0193 |
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| Symbol | cafA |
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| ID | 1246319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlamydia muridarum Nigg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002620 |
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| Strand | - |
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| Start bp | 225813 |
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| End bp | 227351 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637060990 |
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| Product | ribonuclease G |
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| Protein accession | NP_296572 |
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| Protein GI | 15834813 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0692985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACG ATATCTTACT AAACATAGAG TCTAAAGAGA TTCGTTACGC GCATTTAAAA
AATGGCCAAT TGTTTGATCT AATCATTGAA AGAAAAAAGA TCCGCCAGTT GAAAGGGAAT
ATATATAGAG GTCGCGTAAC TAATATTTTA CGAAACATTC AATCCGCCTT CATCAACATA
GATGAGCGAG AGAATGGCTT TATCCACATT TCGGATGTAT TAGAAAATTC TAAAAAATTC
GAACAGATGT TCGACATAGA TGCGGATTCC GATCAATCCG AACCGCTGTC AGAAGAAACA
TCAGAAGCCC CTATTGAAGA ACTTCTTAAG CTGGATAGCC CTGTACTCGT GCAGGTGGTT
AAAGAACCTA TAGGCACGAA AGGAGCTCGA TTAACTTCTA ATATTTCAAT CCCAGGACGC
TACTTGGTTC TTCTACCAAA TTCCCCTCAC CGAGGAGTTT CTCGTAAAAT TGAAGATCCT
TTAATGCGAG ATCAACTTAA ACAGTTAATT CGATCATTTG AAATGCCTCA AAATATGGGG
CTGATCTGCC GAACCGCCAG CATTTCCGCT TCAACAGAAG CACTTATCAA TGAAGCTCAA
GATCTGCTGA ATACGTGGCA AAGTATTTTA GAAAAATTTT ATTCTCCAGA TCATCCGTCG
CTTCTTTATG AAGAAACAGA CATTCTAAAA AAAGCGGTAA TGACTTGCGT AGATAAAAGT
TATAAACGCT TGTTAATAGA TGACTATGCC ACTTATCAAA AGTGCAAACG TTTATTGAGT
AAATATTCCC CAGATACAGC TGTTAAGATC GAATATTATC GTGATTCCGT TCCCATGTTT
GAACGTTTCA ACATTGAGAA GGAAATTGAT CGCGCTACGA AACGGAAAAT ATGGCTTTCT
AGTGGGGGAT ACCTCTTTTT CGATAAAACA GAGGCTATGC ACACAATTGA TGTGAATTCA
GGACGAAGTA CACAACTCGA AAGTGGAGTT GAAGAGACTC TTGTCCAAAT CAATCTAGAA
GCCGCAGAAG AGATTGCTAG ACAGCTCCGA TTGCGAAACA TTGGCGGACT TGTCATTATA
GACTTTATCG ACATGAAATC GCGTAAAAAT CAGCGACGTG TGTTAGAAAG ACTAAAAGAA
CATATGAAAT ATGACGCGGC ACGCTGTACA ATTTTAAGCA TGAGCGAATT TGGTTTAGTA
GAAATGACTC GACAAAGAAA TCGTGAGTCA TTGATGCAAA CCCTATTTAC AACTTGCCCC
TATTGCAATG GGAATGCCAT TATCAAAACC TCTGAGAGTA TCCTTATAGA AATCGAACGT
GATTTAAAGA AAATCATTAA GCATAAGGAA CATACTCATT TGTGTTTAGT CGTTCACCCG
GAAATTGCTC ACTATATGAA ACAAGAGCAA GATGATGTCG AATTAGTCCG CTTAGCTAAA
CAATTGAAAG CTAAGCTACA GATCAATACG TCTGATTCTA TCCATCTTAA CCACTATCAA
TTTTTCTCAT TAATCACAGG AGAAGGAATT GAGCTATAA
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| Protein sequence | MENDILLNIE SKEIRYAHLK NGQLFDLIIE RKKIRQLKGN IYRGRVTNIL RNIQSAFINI
DERENGFIHI SDVLENSKKF EQMFDIDADS DQSEPLSEET SEAPIEELLK LDSPVLVQVV
KEPIGTKGAR LTSNISIPGR YLVLLPNSPH RGVSRKIEDP LMRDQLKQLI RSFEMPQNMG
LICRTASISA STEALINEAQ DLLNTWQSIL EKFYSPDHPS LLYEETDILK KAVMTCVDKS
YKRLLIDDYA TYQKCKRLLS KYSPDTAVKI EYYRDSVPMF ERFNIEKEID RATKRKIWLS
SGGYLFFDKT EAMHTIDVNS GRSTQLESGV EETLVQINLE AAEEIARQLR LRNIGGLVII
DFIDMKSRKN QRRVLERLKE HMKYDAARCT ILSMSEFGLV EMTRQRNRES LMQTLFTTCP
YCNGNAIIKT SESILIEIER DLKKIIKHKE HTHLCLVVHP EIAHYMKQEQ DDVELVRLAK
QLKAKLQINT SDSIHLNHYQ FFSLITGEGI EL
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