Gene TC0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0173 
SymboluvrC 
ID1246298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp203306 
End bp205111 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content40% 
IMG OID637060969 
Productexcinuclease ABC subunit C 
Protein accessionNP_296552 
Protein GI15834793 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGGCG TGCGCATAGA AGATTTTTCT CTAAAAAACG TTTCTTCCTC CCCAGGGGTC 
TATCTTATGA AAGACTCTCA AGGAGTGGTG CTTTACGTTG GCAAAGCCAA AAATTTGCGT
AATCGCCTCT CCTCATATCT TCAAAAAAAC GGGGACTCTC GCGAGCGCAT TCCCTTTCTG
ATGAAACGAA CTGCTGATAT AGATACTATT GTTGTTTCAA ATGAAACAGA AGCTCTTCTC
TTAGAAAATA ATTTAATAAA AAAATACCAG CCTCGCTACA ACGTCCTTCT AAAAGACGAT
AAGACTTTTT TTTGTTTATC GATATCTCTT CAACATCCGT GGCCTAAAAT TGAAGCGATA
CGGACACGAG CGCTCTCACC AAGCAAAAAA AAACAATTAT TATTTGGGCC TTATGTTAGT
GCTGAAGCCT GCTATGCCCT ACTCGAAGTA ATTAGCCATT GGTTCCCTCT TAGAACCTGC
TCCGATCGAG AATTTTCAAC TCGACAACGT CCTTGTGTTC TTTATGAAAT GAAGAGATGT
TTAGCTCCTT GTGTAGGTTT TTGTTCCCAA ACGGAATATC AGGAAACTTT AGAGAAAGCT
ATTCTTTTCC TTAAAGGAGA AGTGGACACT ACGATAGCTA ATTTAGAGGA AGCTATCAAA
AAGGCTTCTC AAGAACATAA ATTCGAACAC GCCGCAGCTT TATATCGCAC GCTCACACTC
ATCCGTCAAA CAATGGCGAA ACAACATGTT GAGAAATTTC AAGCGTACGA TATTGATGTA
CTCGGACTCT ATAGAAAAGG CCCTCTTGCT ATTATTTCTG TACTCTCTGT CTATTCCGGC
AAATTACTCG GGGCTCGTCA TTTCACCTTC CCAGAAAATG CTCAGGAAGA CTCTTCTCTA
TTTTCTTCTT TCATCCTGCA ATATTATGCA GAGAATACTC GTATTCCCAA GCAGATATTC
GTTCCCGTAT CTCCAGATAG CCCAGAACTC CCCTACCTAT TAAATGCTGC CGAACCACCA
AAAATCCGCT GTCCTAAAAC GGAATATGGA AAAGAGCTTC TTGCTCTTGC TCATAAAAAT
GCCGCGGAGC AAGCTAAACC CTTAAATTCC ATCACTCTTC CCTACGAAGA ACTGCAACAA
CTTTTTAAAT TCAGCCAATA TCCGAATCGC ATCGAATGCT ATGACAATGC TCACTTACAA
GGAGAACACA ATGTAGGTGT CTATATTGTA TTTGAAAAAG GGAGTTTCTC TCCTAAACAG
TATCGCACTT TCTCTATCAC TTCTCATGGT GATGATTTAG CAGCATTTGA AGAGGTACTT
ACACGACGTT TCCGCTCTCT TACTACAGAA CTTCCTGATC TTATCGTGAT TGATGGCGGA
CGTAATCAGT TCAGACGAGC ACAGCACATT TTGGAGAAAC TTAATTTAAC AGGAATCGCT
GTAGTTTCTA TTGCTAAAGA ATCGGGAAAC CACAGCAGAG GCTTACAACA AGAGAAACTG
TTTTGTGAAG CTTTCCCTCA GGGGATACTC CTTAATCCTA CCTCAGAAAT TCTTCAATTC
TTCCAACTAT TACGCGATGA AGCACACCGT TTCGCGATCA ACCGTTACCG GAATAAACAT
TCTAAAGCCA TTCTAACCAC AAAAAAAATT CCAGGAATTG GAAAGACAAA AACTACACAT
CTACTTCAAA AATTCAAAAG CTGGAAACGT ATACTCTCAG CTTCAGAAGA AGAACTAAAA
ACAGTTCAAG GACTAACCAA AAAAGACATC CAACGAATTC AGGAAGAGGG AAAAAGAGCA
GAATAA
 
Protein sequence
MIGVRIEDFS LKNVSSSPGV YLMKDSQGVV LYVGKAKNLR NRLSSYLQKN GDSRERIPFL 
MKRTADIDTI VVSNETEALL LENNLIKKYQ PRYNVLLKDD KTFFCLSISL QHPWPKIEAI
RTRALSPSKK KQLLFGPYVS AEACYALLEV ISHWFPLRTC SDREFSTRQR PCVLYEMKRC
LAPCVGFCSQ TEYQETLEKA ILFLKGEVDT TIANLEEAIK KASQEHKFEH AAALYRTLTL
IRQTMAKQHV EKFQAYDIDV LGLYRKGPLA IISVLSVYSG KLLGARHFTF PENAQEDSSL
FSSFILQYYA ENTRIPKQIF VPVSPDSPEL PYLLNAAEPP KIRCPKTEYG KELLALAHKN
AAEQAKPLNS ITLPYEELQQ LFKFSQYPNR IECYDNAHLQ GEHNVGVYIV FEKGSFSPKQ
YRTFSITSHG DDLAAFEEVL TRRFRSLTTE LPDLIVIDGG RNQFRRAQHI LEKLNLTGIA
VVSIAKESGN HSRGLQQEKL FCEAFPQGIL LNPTSEILQF FQLLRDEAHR FAINRYRNKH
SKAILTTKKI PGIGKTKTTH LLQKFKSWKR ILSASEEELK TVQGLTKKDI QRIQEEGKRA
E