Gene TC0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTC0054 
Symbol 
ID1245583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlamydia muridarum Nigg 
KingdomBacteria 
Replicon accessionNC_002620 
Strand
Start bp60401 
End bp63643 
Gene Length3243 bp 
Protein Length1080 aa 
Translation table11 
GC content41% 
IMG OID637060847 
Productpenicillin-binding protein, putative 
Protein accessionNP_296438 
Protein GI15834679 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAA AACGATGTAG ATCACTTTCT GTTCCAGAAA AGGCTAACAG GCTACTTGTA 
GGATTTATTA TTGCTTTGTC TATCATTACT TTACGTATAT GGCATGTAGC TGTTGTTCAG
CACGAGAAAA AAAAAGAAGA GGCTTATCGT CCTCAACGTA GAAGTGTTCC AGAGCATTTT
GATCGTGCTG GAGTATGCGA TCGATTCGGT AAGCCTTTGG CTGAAAATGT TCTACAGTAC
AATGTAGGAA TTTCTTATCG GGCTATAAGG GATATTCCCA CTCGTGTTTG GCATACAGAT
GAAAACGGGA ATAAAAGGCT AGTTCCTGTT CGCAAGGATT ATATTAAAAA ATTCGCCGAT
TTTTTGGCTC AAGAGCTTCA TATGGATCGT GATTTTGTTG AAGATACGAT TCATGCTAAA
GCTTCTGTGT TAGGGTCTGT TCCGCATATC ATTCAAGCAA ACGTATCTGA GCGCACTTTT
TTAAAGCTTA AGATGTTGGA AAAAGATTGG CCAGGATTAC ATGTTGAATC TTCTGTTCGT
CGACATTATC CAGAGGGACG TACTGTAGCG GATTTGTTAG GATATGTAGG CCCAATTAGC
GCAGAGGAAC ACAGAAAAAT TACTAGGGAA CTGGGGAACT TACGAGAATG CATTCGTGCT
TATGAAGAGG GAGAAGATCC CAAATTCCCG TTAGGAATAT CGAGTATCGA TCAAGTTCGT
AAGCTTTTGC ATGAATTAGA GATGCATGCT TATGGATTGA ATTCTTCGAT TGGAAAGTTA
GGTGTAGAGG CTTTTTGTGA CCGGAAATTA AGAGGGTTAA TCGGTAAGCG ATCTATGCTT
GTCGATCGAC GGGGGAACTT TATTCAAGAG ATGGAAGGTT CTTTAGTTGG AAGCCCTGGG
AGGAAAATAC AACTAACTAT TTCTACAGAA TTGCAAGCTT TTGCCCATGA ACTTCTTGCG
GAGCATGAGC GAGGAGAGGC TTTTCGAGAT TATCGACAAT GGCGTCATCA ACAATATTTA
CCTCCTTTTT TCCCTTGGAT AAAAGGAGGC GCTATTGTTG CTATGGATCC TAAGAATGGC
CAAATTCTGG CTATGGCTTC TTCCCCGCGT TACGATAATA ATGATTTTAT CAATATGAAA
GACTCCGCTA ATCAAGAGGA GTGTCGTTCT TCCGTTTTAC GATGGTTAGA GAATCTTGAA
TATATAGGAG AGGTATTCGA TCGACGTGTT CCTTTGAGAA GAGAGCGATT AGATCCTTTG
ACAGGGAAAT ACTTTGATGA GGAACTCTCT TTTTCTTATC GAGCCTTTTT AGACTTTATT
CTTCCTGATA CTTCGAAAGT AAAGCAGCTA TTGTGTGAAA AGGGCTCGGT CGGACTTTCT
ATCTACTTGC AAAGTAAGGT AGATCAGCTT TTGGAAATAT TTGATTCGGA AGCGAAAGAT
TGTGGACTGG TTTTTGATGT CATTTTCCAA AAAGCAGATG GCCATGAGCC TATAGGAGAG
GTCACTTCTC TTAAACGTCA GAAACAGTTT CGGAAAATTT TGGAGGAAAG AAGTGAGGAG
ATTCAAGAAT TTCGAAAACG TTTTGAATCC CTATTTGTTG AGCTTCCAGC CAATTACGAT
AAAGTACTGT TTTTAGATTT GTTGCGTGCA GCTGTAGATC CAGAAAGAGT TTCGATTTCT
TTGCTGTCGG CAATTGGCCA TATGTCTGTG TTAGATTTTG TAGATTATCA AGGACATTTC
ATTGCTCTAC GTAAGGCTTT TGCCAAGTTG ATGGAGAATA TATTTATCGA TCAAGACTTT
GCTGTTTGGA GGGAAGAACA TTTTACGGAT TTCCTTAAAC AGAAAAGAGA AGAAGAGCTT
GCTCGTAAAC AAAGATATCC GACGCCTTAT GTGGATTACT TAGTTGAAGA GAGAACGCGG
CAATATGCTC TTTTTTGCCA AAGGTATATG GACTCATTTA TTGCTTTTCT CTTGTCGGAT
ACAGAAATTC CCTCTGATGA TCCTTATTAT CGAGAACTTG CTTGTTGGCG TCAGGAATTG
CGTTCTGGAG CGCATCCAGC CTTAGAATGG CGTGAGCATT ACGAGTTTTT ACATAAACGT
TTATTGCAAA CATCCTATGA TTTGTGTGAG TTGTTCGCTG CTTTTCGTGA ATTCGCAGAA
CTCAAGCGTC CTTTGTATGG GCAATATCCT CTGACTCTTA CACGCAATGT TGAACAAATT
GAGCAAGATC TTATCGCCTC TTTTTATCCA TTGTATGGTT ACGGTTATCT ATCCGCGCAT
GCCTTTGGTC AGGCGGCTAC TTTAGGGTCT ATTTTTAAAT TAGTTTCTGC TTATTCCGTA
CTTGTGCAAC ATCTCTCTAG TCCAGAGGAC TTATCTAAGC TATTGGTGAT CGTTGATAAG
CAATCATTAG GGTACCGTTG CGGGAAACCT CATGTCGGAT TTTTTAAAGA TGGTTCTCCT
ATAAACTCCT TTTTCAAAGG AGGGATCCTC CCGGGGAATG ATTATTCTGG CAGAGGATAC
ATTGATCTTA TTTCTGCTTT AGAAATGTCA AGTAACCCTT ATTTTTCTCT TCTTGTGAGT
GAATACCTTT CTGATCCAGA AGATTTATGT GAAGCTGCTA GGCTTTTCGG ATTTGGAGAA
AAGACAGGGG TTGGCCTTCC TGGAGAATAT GCAGGGAGAG TGCCAGTAGA TGTCGCGTAT
AACCGTTCCG GGTTATACGC GACAGCTATA GGGCAGCATA CACTTGTTGT AACTCCTTTA
CAGACAGCTG TCATGATGTC AACATTAGTT AATGGAGGAA GTGTATATCA ACCGAGTTTA
ATACAGGGAG AGTGGTATGA AGGAAAGTTT TTCCCCGAGA CTGTTAAAAA GAAAAGAGAT
ATTTTCTTGC CCGATCCCAT CGTGCATCTC TTTAAGAAGG GTATGCATAA CGTGATTTGG
GGACAGTACG GAACGACAAG ATTTATGCGT CAACGATTTG CTCCTGAACA ACTGTCTCGT
ATTATCGGTA AAACGAGTAC CGCTGAGGTA ATCGCTCGCG TGAGCTTAGA TCGTGAACGA
GGGCGTATGA AATTGAAAGA TGTATGGTTT GGTGCGATTG GGTATGAAGA TGAGGCGCTA
ACGCTCCCTG ATATTGTCGT TGTTGTTTAT TTGCGACTCG GAGAGTTTGG GAGGGACGCG
GCTCCGATGG CGGTGCGCAT GATAGAGAAA TGGGAAGAAA TTCGTAAAAA ATCTCTCCAT
TAA
 
Protein sequence
MKRKRCRSLS VPEKANRLLV GFIIALSIIT LRIWHVAVVQ HEKKKEEAYR PQRRSVPEHF 
DRAGVCDRFG KPLAENVLQY NVGISYRAIR DIPTRVWHTD ENGNKRLVPV RKDYIKKFAD
FLAQELHMDR DFVEDTIHAK ASVLGSVPHI IQANVSERTF LKLKMLEKDW PGLHVESSVR
RHYPEGRTVA DLLGYVGPIS AEEHRKITRE LGNLRECIRA YEEGEDPKFP LGISSIDQVR
KLLHELEMHA YGLNSSIGKL GVEAFCDRKL RGLIGKRSML VDRRGNFIQE MEGSLVGSPG
RKIQLTISTE LQAFAHELLA EHERGEAFRD YRQWRHQQYL PPFFPWIKGG AIVAMDPKNG
QILAMASSPR YDNNDFINMK DSANQEECRS SVLRWLENLE YIGEVFDRRV PLRRERLDPL
TGKYFDEELS FSYRAFLDFI LPDTSKVKQL LCEKGSVGLS IYLQSKVDQL LEIFDSEAKD
CGLVFDVIFQ KADGHEPIGE VTSLKRQKQF RKILEERSEE IQEFRKRFES LFVELPANYD
KVLFLDLLRA AVDPERVSIS LLSAIGHMSV LDFVDYQGHF IALRKAFAKL MENIFIDQDF
AVWREEHFTD FLKQKREEEL ARKQRYPTPY VDYLVEERTR QYALFCQRYM DSFIAFLLSD
TEIPSDDPYY RELACWRQEL RSGAHPALEW REHYEFLHKR LLQTSYDLCE LFAAFREFAE
LKRPLYGQYP LTLTRNVEQI EQDLIASFYP LYGYGYLSAH AFGQAATLGS IFKLVSAYSV
LVQHLSSPED LSKLLVIVDK QSLGYRCGKP HVGFFKDGSP INSFFKGGIL PGNDYSGRGY
IDLISALEMS SNPYFSLLVS EYLSDPEDLC EAARLFGFGE KTGVGLPGEY AGRVPVDVAY
NRSGLYATAI GQHTLVVTPL QTAVMMSTLV NGGSVYQPSL IQGEWYEGKF FPETVKKKRD
IFLPDPIVHL FKKGMHNVIW GQYGTTRFMR QRFAPEQLSR IIGKTSTAEV IARVSLDRER
GRMKLKDVWF GAIGYEDEAL TLPDIVVVVY LRLGEFGRDA APMAVRMIEK WEEIRKKSLH