Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_2279 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | + |
Start bp | 2071736 |
End bp | 2073382 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | |
Product | CRISPR-associated helicase Cas3 |
Protein accession | ACX92460 |
Protein GI | 261602857 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.169007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAG GGATACAGAA AGTCTTGGAC ATTCTCAACT GTCGTGATAA TTCAATTTAT TATGAATGTG AAGACGTGAA CTTCATTCTA ACGTTCCCAA CTGGTTACGG AAAAACCACG CTTTCTTTGG AAATCGTCCG AATGATTGAC CTAAAGCCCA CCCAAAACTT CAGTAGGTTA ATTCACGTTG TTCCTACTAG GTCGTTGGCA AAGGATATTC AGAATTCAGC TTGTGAAAGA GGATTAGGAT TTGCAGTTCA ATACTCCTTC ACTCCCTCTC ACATAAAATC CCCACTTTTC TTAGCAAAGT TCATCATAAC GACTTACGAT TCGTTCTTAC TAAACTTGTA TAAGGCGTCA ATAGGAGAGC CTTTCTCATA TCACGGTCAT TACGATTTGC CCAGATTTGG AATATACACT TCTCTAGTAC ACTTCGATGA ATTCCACTTA ATGAATGAGG GAAATTCATG GACCTCTCTG TTAGGGGCAG TTAGGCACTT ATCTAAAGTG GGAGTGAATA TGATACTCTC ATCAGCTACG CCCAGTAAGA GCGTGGAGGA GGAATTAATC AGAATGATGG AGAACCGGAA AGTAGTTAGA TTGGCAGTTG TAAACGAGTA CGGCGAATCT GTGAAAAATA GGAATTGTGT GAAAGTGAGT GAAGGTTACT ATGAGTGTGA AGTGGGAAGC GTGAAGTATA CTAGCGTAGA GGTAGAGGAT AAGATAAATG CCCCTGATAT AAACATCAAT TTTCTTGATA AAGAGGATGA TGTATTAGGA GTAGTTAGGA GAAACAAGGA TAAGAAAATT ATGGTCATAG TGAACACTGT TGATAAGGCA ATTACGCTCT ACGAAAAGTT AAGGGATTTG TCTCCTTGCT TAATACACTC GAGGTTTAAG ATAGGTGATA GGGATGAGAA GTTGAGAAAG GAGTGTAATA TTATAATTGC AACTCAAGTC ATTGAGGTTG GCGTTAACAT TTCCTCTGAG GTGATGATAA CTGAACAAGC TCCAATAACC TCTATTGTAC AGAGAGTTGG TAGGCTATTA AGAGATAACA AAAAGGATAA GGGGGAACTT TACATATGGA AGAGCGGGAA TTATTATCCC TACGACAAAG ATGAAGTTGA AAACACTATT AAGGAGTTGG AAAGTAAGAA AAACGACATA TCCTTAAAGG TACCTTCAAG TTACGGAGAA ATTGTAGATA GAGTTATAAA GCCTCCAAGA GGAGACCCTG ATTTATTAAG AGAGTTAGAT AATATAGCGG AGAACTTATT CGCAACTAGA GAGGACTTAG AAAAATTACT TGATAAGTAC TGTACTTTAA CTAACTCATA TGTTATAAAC GTAGCGTATG ATACGCCAGC TTCAGAGAGG GATCTGATTC CACTTGACGG AGATTTGGCA CTTAAAATAG CTATTAAGGG TAACGATTGT GTCTACGCTT ACGTAGAGGA ATACAAGCCG GAGAGAAAGG TAGCGGTTGA TAAGGTAAAT GTAAGGGAAA CTTGTGTTGA AATAGCAAAA CCTTGTAGAG ATTATAGGAA AGTCTTTTAT GATGGAGATA AACGCTATAT AATATACGCA CTGAAGATAG ATAAAGAACT TTACGATGAG GAAACTGGGT TGAGGTTGAG GAAATGA
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Protein sequence | MRKGIQKVLD ILNCRDNSIY YECEDVNFIL TFPTGYGKTT LSLEIVRMID LKPTQNFSRL IHVVPTRSLA KDIQNSACER GLGFAVQYSF TPSHIKSPLF LAKFIITTYD SFLLNLYKAS IGEPFSYHGH YDLPRFGIYT SLVHFDEFHL MNEGNSWTSL LGAVRHLSKV GVNMILSSAT PSKSVEEELI RMMENRKVVR LAVVNEYGES VKNRNCVKVS EGYYECEVGS VKYTSVEVED KINAPDININ FLDKEDDVLG VVRRNKDKKI MVIVNTVDKA ITLYEKLRDL SPCLIHSRFK IGDRDEKLRK ECNIIIATQV IEVGVNISSE VMITEQAPIT SIVQRVGRLL RDNKKDKGEL YIWKSGNYYP YDKDEVENTI KELESKKNDI SLKVPSSYGE IVDRVIKPPR GDPDLLRELD NIAENLFATR EDLEKLLDKY CTLTNSYVIN VAYDTPASER DLIPLDGDLA LKIAIKGNDC VYAYVEEYKP ERKVAVDKVN VRETCVEIAK PCRDYRKVFY DGDKRYIIYA LKIDKELYDE ETGLRLRK
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