Gene Ssol_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2279 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp2071736 
End bp2073382 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content38% 
IMG OID 
ProductCRISPR-associated helicase Cas3 
Protein accessionACX92460 
Protein GI261602857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.169007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAAG GGATACAGAA AGTCTTGGAC ATTCTCAACT GTCGTGATAA TTCAATTTAT 
TATGAATGTG AAGACGTGAA CTTCATTCTA ACGTTCCCAA CTGGTTACGG AAAAACCACG
CTTTCTTTGG AAATCGTCCG AATGATTGAC CTAAAGCCCA CCCAAAACTT CAGTAGGTTA
ATTCACGTTG TTCCTACTAG GTCGTTGGCA AAGGATATTC AGAATTCAGC TTGTGAAAGA
GGATTAGGAT TTGCAGTTCA ATACTCCTTC ACTCCCTCTC ACATAAAATC CCCACTTTTC
TTAGCAAAGT TCATCATAAC GACTTACGAT TCGTTCTTAC TAAACTTGTA TAAGGCGTCA
ATAGGAGAGC CTTTCTCATA TCACGGTCAT TACGATTTGC CCAGATTTGG AATATACACT
TCTCTAGTAC ACTTCGATGA ATTCCACTTA ATGAATGAGG GAAATTCATG GACCTCTCTG
TTAGGGGCAG TTAGGCACTT ATCTAAAGTG GGAGTGAATA TGATACTCTC ATCAGCTACG
CCCAGTAAGA GCGTGGAGGA GGAATTAATC AGAATGATGG AGAACCGGAA AGTAGTTAGA
TTGGCAGTTG TAAACGAGTA CGGCGAATCT GTGAAAAATA GGAATTGTGT GAAAGTGAGT
GAAGGTTACT ATGAGTGTGA AGTGGGAAGC GTGAAGTATA CTAGCGTAGA GGTAGAGGAT
AAGATAAATG CCCCTGATAT AAACATCAAT TTTCTTGATA AAGAGGATGA TGTATTAGGA
GTAGTTAGGA GAAACAAGGA TAAGAAAATT ATGGTCATAG TGAACACTGT TGATAAGGCA
ATTACGCTCT ACGAAAAGTT AAGGGATTTG TCTCCTTGCT TAATACACTC GAGGTTTAAG
ATAGGTGATA GGGATGAGAA GTTGAGAAAG GAGTGTAATA TTATAATTGC AACTCAAGTC
ATTGAGGTTG GCGTTAACAT TTCCTCTGAG GTGATGATAA CTGAACAAGC TCCAATAACC
TCTATTGTAC AGAGAGTTGG TAGGCTATTA AGAGATAACA AAAAGGATAA GGGGGAACTT
TACATATGGA AGAGCGGGAA TTATTATCCC TACGACAAAG ATGAAGTTGA AAACACTATT
AAGGAGTTGG AAAGTAAGAA AAACGACATA TCCTTAAAGG TACCTTCAAG TTACGGAGAA
ATTGTAGATA GAGTTATAAA GCCTCCAAGA GGAGACCCTG ATTTATTAAG AGAGTTAGAT
AATATAGCGG AGAACTTATT CGCAACTAGA GAGGACTTAG AAAAATTACT TGATAAGTAC
TGTACTTTAA CTAACTCATA TGTTATAAAC GTAGCGTATG ATACGCCAGC TTCAGAGAGG
GATCTGATTC CACTTGACGG AGATTTGGCA CTTAAAATAG CTATTAAGGG TAACGATTGT
GTCTACGCTT ACGTAGAGGA ATACAAGCCG GAGAGAAAGG TAGCGGTTGA TAAGGTAAAT
GTAAGGGAAA CTTGTGTTGA AATAGCAAAA CCTTGTAGAG ATTATAGGAA AGTCTTTTAT
GATGGAGATA AACGCTATAT AATATACGCA CTGAAGATAG ATAAAGAACT TTACGATGAG
GAAACTGGGT TGAGGTTGAG GAAATGA
 
Protein sequence
MRKGIQKVLD ILNCRDNSIY YECEDVNFIL TFPTGYGKTT LSLEIVRMID LKPTQNFSRL 
IHVVPTRSLA KDIQNSACER GLGFAVQYSF TPSHIKSPLF LAKFIITTYD SFLLNLYKAS
IGEPFSYHGH YDLPRFGIYT SLVHFDEFHL MNEGNSWTSL LGAVRHLSKV GVNMILSSAT
PSKSVEEELI RMMENRKVVR LAVVNEYGES VKNRNCVKVS EGYYECEVGS VKYTSVEVED
KINAPDININ FLDKEDDVLG VVRRNKDKKI MVIVNTVDKA ITLYEKLRDL SPCLIHSRFK
IGDRDEKLRK ECNIIIATQV IEVGVNISSE VMITEQAPIT SIVQRVGRLL RDNKKDKGEL
YIWKSGNYYP YDKDEVENTI KELESKKNDI SLKVPSSYGE IVDRVIKPPR GDPDLLRELD
NIAENLFATR EDLEKLLDKY CTLTNSYVIN VAYDTPASER DLIPLDGDLA LKIAIKGNDC
VYAYVEEYKP ERKVAVDKVN VRETCVEIAK PCRDYRKVFY DGDKRYIIYA LKIDKELYDE
ETGLRLRK