Gene Ssol_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_2090 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1870837 
End bp1871874 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content35% 
IMG OID 
ProductHistone deacetylase 
Protein accessionACX92296 
Protein GI261602693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTGA CATATCAGAA TTCGTTAGGG ATCGTTTGGG ATCAAAGATT TACTGAAATC 
TCTTTCTCTC ACCCCATGAT TAGGGATATA TCTAAGGCTA GAGTAAGAGA TTTCATCAAA
TTAGCTAAGG AAAAAGTCTC TTTTGTAGAA ATAAGGCCAG AATACGCTAC TAAAGAGGAT
TTGATGGTTG TTCACACAAG GGATTACATT GGTTTACTCG AAGAGAGCAG TAAGATTCCC
TATATAGGAT TTTTAGATCA AGGTGATACT GTTCATTATC CAGGGATGTT TGAAGATATA
CTACTAGTAT TAGGTTCCTC ATTTACTGCC ATAAAATATT CTAAATTCTT GGATTACGTC
TATATTCCTC TAGGCGGATT TCATCACGCA ATGCCTAATA GAGCAGTAGG GTTTTGTCCG
ATAAATGATG TTGCAATAAC AGCTCTCAAA CTATTAGAGA AGGGTGAAAG GGTTGCTATT
GTGGATGTGG ACGCTCATCA TGGCAACGGT TTACAATTCA TACTATATGA TAAACCAATT
TTAAAGATAA ATATTTACGC ATATGATGGT AACTTTTTCC CTGGAACTGG GAAGATTGAT
GAAATAGGCG AGGGGAAGGG TAGGGGGTAT AACATAAATA TTCCTTTACC TTTAGGATCA
ACGGATGATA TTTTTGAGAA AAGTCTAGAA ATATTAGACT TATTAGAACT TTATAATCCT
TCTTATGTTC TAGTCGTAGC TGGAGTAGAT GGTCATAAAA ATGATCAGCT AAAATCCTTA
GACCTAACAA CTAATTCCTA TAACCTATTA GGTCTTAGGA TAAGAAGAAT AAAGAAGACC
ATAAATTCTA GTATCATTGC TTACGGTGGA GGGGGATATG GTCCAATGTC GTCCTTAAGT
ATGGTTTCGT TCTTAGAAGG ATTGTTAGGC AGAAGAACTT CTTATGAACC GCTTACATCT
TCTGAGGATA TAGGAAAAAT AAGAAGAATA GAAAAAATTA TTTCAAGATT TAAAACTCTT
TCCAACTTCT TTAGCTAG
 
Protein sequence
MRLTYQNSLG IVWDQRFTEI SFSHPMIRDI SKARVRDFIK LAKEKVSFVE IRPEYATKED 
LMVVHTRDYI GLLEESSKIP YIGFLDQGDT VHYPGMFEDI LLVLGSSFTA IKYSKFLDYV
YIPLGGFHHA MPNRAVGFCP INDVAITALK LLEKGERVAI VDVDAHHGNG LQFILYDKPI
LKINIYAYDG NFFPGTGKID EIGEGKGRGY NINIPLPLGS TDDIFEKSLE ILDLLELYNP
SYVLVVAGVD GHKNDQLKSL DLTTNSYNLL GLRIRRIKKT INSSIIAYGG GGYGPMSSLS
MVSFLEGLLG RRTSYEPLTS SEDIGKIRRI EKIISRFKTL SNFFS