Gene Ssol_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1982 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1769121 
End bp1770251 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content35% 
IMG OID 
Productacetylornithine deacetylase or succinyl-diaminopimelate desuccinylase 
Protein accessionACX92193 
Protein GI261602590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATATC CAGTAAAACT ACTGAAAGAC CTAGTACAAA TCAAAACAGC AAATCCACCT 
GGGTCAGAAT ACGAGAGCAT TTCGTTTTAT CTGAAAGACC TATTTAACGA TTTAGGTTTT
CAAATACAAC TAATCGAAAT ACCAGAGGAA TATATGGATA AATACTACAT TTACTCTCCA
TCACACAAAG GAAACAAAAG AATAATAGTA ATTGCCAAGA ATAGTCCCAA CCCTATACTC
CACTTCAACT TCCATTATGA CGTCGTTCCA CCAGGAGATG GTTGGTTAAC AAACCCTTTC
GAACTCAAGG TAGTCGATAA TAAGGCGTAC GGAAGAGGAA CTTCAGATAT GAAAGGTTCA
ATTGTGAGTT TATATTTAGC CCTATCTAGA TTTAATGATT TACCAATCGA GATAGTGTTT
GTCCCAGACG AGGAAAGTGG AGGTATAGGG ACTAAATACT TGACAGAGGA AATTCGTATC
GCTCCTAGTA CTGCTATATT TGGTGAACCT AGTTTTCCTA ACGTGTATAT AGGGCATTTG
GGTATAGTGA GGGGTATAAT AAAAATATTT GGTAAACAAG CTCACGCAAG CAACCCAAAA
GATGGCATTA ATGCCTTTCT GCTAGCTTCT AAACTAGCAC TAAAACTACA AGAAAAATTA
GGAAATGAAA TAGTTAACCT TGGGGGATAT ACGCTTAATC CCACTAATAA TGATGGAATA
GTACCGGGTT TCTTTGCCTT TAGCTATTAT AGAGCTATTC CTCCCCATGA TAATAGAACC
CCAGAATTTG ACAAGAATGT AATTGACACT ACAGCTAGAG AAGTAGGAAT AGAGTATAAT
TTTGAGATTA AATCTTTCAT TTCAGGCTCA GTTTCTAATC CAGATTCCAG TGTAGCTAAA
GCGTTTAAGT TTTGTATCAC TTCAACTCTT AACGTAGTAC CTAAAGAACT AATAAGTAAT
ATAAGATATG ACGCAGTCTT CTATAAAAAT CTCGATTCGA TAAACTTTGG CCCAGGAAGT
TTAGATCAAG CTCATGTACC TAATGAGTAT GTTGAATTAG ATAACATAGA GAAAACTATT
GTGATTTATG AATGCGTGAT GAAAAGGATT TATTTTAATA ATTATCGATA A
 
Protein sequence
MLYPVKLLKD LVQIKTANPP GSEYESISFY LKDLFNDLGF QIQLIEIPEE YMDKYYIYSP 
SHKGNKRIIV IAKNSPNPIL HFNFHYDVVP PGDGWLTNPF ELKVVDNKAY GRGTSDMKGS
IVSLYLALSR FNDLPIEIVF VPDEESGGIG TKYLTEEIRI APSTAIFGEP SFPNVYIGHL
GIVRGIIKIF GKQAHASNPK DGINAFLLAS KLALKLQEKL GNEIVNLGGY TLNPTNNDGI
VPGFFAFSYY RAIPPHDNRT PEFDKNVIDT TAREVGIEYN FEIKSFISGS VSNPDSSVAK
AFKFCITSTL NVVPKELISN IRYDAVFYKN LDSINFGPGS LDQAHVPNEY VELDNIEKTI
VIYECVMKRI YFNNYR