Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssol_1965 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfolobus solfataricus 98/2 |
Kingdom | Archaea |
Replicon accession | CP001800 |
Strand | - |
Start bp | 1749187 |
End bp | 1750887 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | Starch synthase |
Protein accession | ACX92176 |
Protein GI | 261602573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00319381 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGA TTGAATCATT GTGGTTACCT GAGGACATTA AAAAAGTGTG GATGATAACA TTTGAATTGC AAAAGATAGC AAGTGTTGGA GGATTAGGAA ATGCTGTATA TAACATAGCT AAACATCTAG CTGAAAAGGG AGTAGATATT ACGGTTTTCT TGCCATCTCA TGGAAGGCAT CTAAATGAAT ATTATAGGTC TCTCTTAAGT TTAAGACATA TTGACATGAT CGTTGAGGGA AGAAGAAAGG GTATAGATAA TAACTATTAT AATTATAAAA TAGGATTTGA AGAAGGAAAA ATAGATAATT TCAAGGTAAT TTTGGTAAAA GGATTAGATT ATAACACTGG TAGGGTATTA GATTCATGGA ATATCTATGA TAACACAATG GAGAAAATTT CGCTATTAAC AAGAGGATTA GAGGGGTTCA CTTTAGGCAA TCTATCTAAC CTTCCAGATA TAATCCATGC ACAAGATTGG CACGCCGTAA TTCCCGCAGT TAGGATAAAA CAACTCTTGG AAGAGAGACG AATAATCGTC CCATTTATTT ACACTATTCA CTTACTGAAT TACATTGGTG TACCTTGGCA CTACGCTTCT CAAGACTGGT CTGGAATTGA GGATTGTTGG CATTATATTT GGATGGTAGC TAAGCATGAA TTATATAAAT ATTCATATGT ATGGGATGTG TTGTCAGGTG GAAAAATTGA GAAATTTGGT TGTTACGAGG CTGATATGGT GAGTAGTGTA AGTTACAGTT ATTTAAGTTT TGACGTATTT AATTTTGTAG GAAATTGGGT AGCCAATAAA TCATGTGTAA CGTATAATGG TACGGATTGG GATGTGGAAG AGATCCAAAA TAAGGCTGTT ACAATGTATG GAACTAAGGA CAGAAGGGAG TTAAGGAGAA GGCTACTTTC ATCTCTGCAC TCCCTAAGGG TTATTCCAGA GGATTACACT ACCGGCAATA TGCTATGGAA TAATAGAAAT AGACTAGGAT TAAGAGATGA TTGGACTTAC GACGATTTAG GGGAAGGACC CCTTGTTCTA TTCACTGGGA GATTAGTATA TCAAAAAGGT GTAGATTTAC TTTTAAGGGC TATGAAAACA GTTGTGAATG AGATAAATAA TGCTAGGCTC TTAATTTTTG GGCTACCGTC TGGGGATTAC AACTTACTTT GGGATATTAT AGAGAGGGCT TCAGAAATTA AGGATAATAT TAGGTTAATA GTGGGTAGAA TGGATTTAGA TTTATATAAA TTGTTTCACT ACGTATCTTC AGTCTTCGTC ATTCCATCTA GATGGGAACC ATTTGGCATA AATTCAATTG AGGCTATGGC TATGGGGTTG CCAGTAATTG CCTATAGCGT AGGGGGTTTA AGAGAAACAG TCGTTGACAT TAGGGAGGAT AAGAATAATG CCACAGGTCT CTTAATTAAG CCTGAAAGTA TAGACGAATT AGCTAGAGCC ATAAGGATTG CATTATATTT GTCAGAGGCT TCTGAGCTAA ATAAAAGCGA TTTGTTATAT AAGGCGAGTG AGGTTAAAGT AGATGATACG AGATACTGGG ATAAGGTACG TGAAAATGCA ATAACTAGGG TTAAGAGTAG ATTTAGATGG GATGCAGTGA TAAACTCCTT AACTGAGTGT TATAGAAAGA CTCTCGATAT GGCTAAATAT AGGGCTTTAG CCTCTTTTTG A
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Protein sequence | MKRIESLWLP EDIKKVWMIT FELQKIASVG GLGNAVYNIA KHLAEKGVDI TVFLPSHGRH LNEYYRSLLS LRHIDMIVEG RRKGIDNNYY NYKIGFEEGK IDNFKVILVK GLDYNTGRVL DSWNIYDNTM EKISLLTRGL EGFTLGNLSN LPDIIHAQDW HAVIPAVRIK QLLEERRIIV PFIYTIHLLN YIGVPWHYAS QDWSGIEDCW HYIWMVAKHE LYKYSYVWDV LSGGKIEKFG CYEADMVSSV SYSYLSFDVF NFVGNWVANK SCVTYNGTDW DVEEIQNKAV TMYGTKDRRE LRRRLLSSLH SLRVIPEDYT TGNMLWNNRN RLGLRDDWTY DDLGEGPLVL FTGRLVYQKG VDLLLRAMKT VVNEINNARL LIFGLPSGDY NLLWDIIERA SEIKDNIRLI VGRMDLDLYK LFHYVSSVFV IPSRWEPFGI NSIEAMAMGL PVIAYSVGGL RETVVDIRED KNNATGLLIK PESIDELARA IRIALYLSEA SELNKSDLLY KASEVKVDDT RYWDKVRENA ITRVKSRFRW DAVINSLTEC YRKTLDMAKY RALASF
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