Gene Ssol_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1842 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1636390 
End bp1636746 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content34% 
IMG OID 
ProductSjogrens syndrome scleroderma autoantigen 1 
Protein accessionACX92056 
Protein GI261602453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACG AAAGCGAGGT AGGTGTAAAG AAGGCTGCAG AACTTTTGCG TCAAGGCGCT 
ACAATGTTAG AAGAGGCTTG CCCTATATGC AAAATGCCAT TGTTTAAATT GAAAAATGGT
GATGTTTTGT GTCCAGTTCA CGGAAAAGTA TATATAGTGA AGAGTGATGA TGAAGAAAAG
GTTATAAAAA GAAATTTGCA ATTAGATGAG ATAGAGAATA TACTAATTGA TGGTCTATAT
TTAAGCGCAA AAAAGATTAA GGAAGATCCA TCAGATTCTG AAACGATAGT CCAGATTGTA
CGATATTTAG ATGCGTTAGA GCGATTAAGG AAGATTAAAT CAAATTCTTC TGAATGA
 
Protein sequence
MTNESEVGVK KAAELLRQGA TMLEEACPIC KMPLFKLKNG DVLCPVHGKV YIVKSDDEEK 
VIKRNLQLDE IENILIDGLY LSAKKIKEDP SDSETIVQIV RYLDALERLR KIKSNSSE